Gene Sked_17420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17420 
Symbol 
ID8633378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1943359 
End bp1943937 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content72% 
IMG OID 
ProductHIT family hydrolase, diadenosine tetraphosphate hydrolase 
Protein accessionYP_003314503 
Protein GI269795048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.657455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0943717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC AGGCATCCGA CCACCCGGGT GAGCCCGACG GGCTCGAACG TCTCTGGACG 
CCGCACCGCA TGGTGTACAT CGGCGGGCAG GACAAGCCGG CCGACGCGTC CTCCGACGAG
TGCCCGTTCT GCCGGGTGCC CTCGCTCTCC GACGAGGACG GCCTCGTCGT CGCCCGGGGC
GAGCACGCCT ACGTCGTGCT CAACCTCTAC CCGTACAACT CCGGGCACCT CCTGGTGTGC
CCGTACCGGC ACGTCGCGGA CTACACGGAC CTCACGACCG ACGAGGTCGT GGAGGTCGCC
GAGCTGACCC GGACGGCCAT GTCGGTCGTC CGGGCCGTCT CCGGTCCGCA CGGCTTCAAC
CTGGGCATGA ACCAGGGGGC CGTGGCCGGT GCCGGCATCG CGGCGCACCT GCACCAGCAC
GTGGTCCCGC GCTGGGCAGG CGACGCGAAC TTCCTCCCGG TGGTGGGGCG GACCAAGGCG
CTGCCGCAGC TGCTGTCCCA GACCCGCGAC CTGTTCGCCG ACGCCTGGCC CGCCACCCCG
CACACGACCA CGACCACACC GGAGGACGAG CCGTGCTGA
 
Protein sequence
MSEQASDHPG EPDGLERLWT PHRMVYIGGQ DKPADASSDE CPFCRVPSLS DEDGLVVARG 
EHAYVVLNLY PYNSGHLLVC PYRHVADYTD LTTDEVVEVA ELTRTAMSVV RAVSGPHGFN
LGMNQGAVAG AGIAAHLHQH VVPRWAGDAN FLPVVGRTKA LPQLLSQTRD LFADAWPATP
HTTTTTPEDE PC