| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_17250 |
|---|
| Symbol | |
|---|
| ID | 8633361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1926012 |
|---|
| End bp | 1927055 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | Zn-dependent hydrolase, glyoxylase |
|---|
| Protein accession | YP_003314486 |
|---|
| Protein GI | 269795031 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.733457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA CGACCACAGG CACCACGACA GGCCCCGGCC CCACGCACGA CGGGTACGCC
ACGTGCGCCC CGGCAGCCGA CTGGTTCCAC GTCGCCGACC TCGGCGACGG CATCACGCTG
ATCTCCGAGC CCGGGCACGT CAACTGCTTC CTCGTGCAGG GCACCGAGCG CGCCCTCCTC
TTCGACACCG GCACCGGCCT CGCCCCCGTC TCCGAGGTGG TCCGCCACCT CACCGACCTC
CCCCTCCTGG TCGTCGTGTC GCACGACCAC CTCGACCACC GGGGCGGGAA CGCCGACGTG
GTGGCGCACG CCGACGAGCT CGCGCTCGTC GGCATCGCCG CCCACCCGAC CGCCCTCGAG
CCGGGCTCGA CCCTCCACGG CGCGGTCGAC CGCGGGTTCC TCGACGCGTA CGCCCAGGCG
ATGCGCACCG TGGTGGACCA GTACGAGACC TTCGCCGCCC TCGACGCCCA GAGCTTCTAC
GTCCTGCCCA CCCTCGACGC GGGCGACAGC CCGCTGCGCC CCGTCCCCGA CACGACGTCG
TGGACGGTCC CGGCAGTCCG GCCCGACGTC GCGCTCGCGG ACGGCGACGT CCTCGACCTC
GGCGGCCGGT CGCTGCGTGT GGTGCACACC CCCGGGCACA GCCCGGACTC GCTCTGCCTC
GTCGACGACG CGCACGGCGT GCTGCTCGCA GGGGACACCG TCGTCGCGGC CGCCTCGTGG
CTGCACGGCG CGGGAGCCGA CCTCGACGAC TTCGCCCGCT CGACGGCCGC CCTCGCCGGG
CTGCCGCTGC GCCGGGTGCT CACCGCCCAC AACCTCTGCG CCGAGCGCCC GCCGTCCTAC
GTCCGCTCGG TGGCCCAGAC GGCCGAGCGG GTGCGCGCCG GCCAGAGCAC GCCGAGGCCG
GGGACCGACC TGCTGGGCAA CCCCGTCGAC CGCCACACCC ACGACGGCGT GACGCTGCTG
CTGCCGCCCA GCCCCACGTC GCCCAGCCCC ACGTCGTCCG CCGCACCATC CAGGACTGAC
CCGCAGACCG AGGAGATCGC ATGA
|
|---|
| Protein sequence | MTTTTTGTTT GPGPTHDGYA TCAPAADWFH VADLGDGITL ISEPGHVNCF LVQGTERALL
FDTGTGLAPV SEVVRHLTDL PLLVVVSHDH LDHRGGNADV VAHADELALV GIAAHPTALE
PGSTLHGAVD RGFLDAYAQA MRTVVDQYET FAALDAQSFY VLPTLDAGDS PLRPVPDTTS
WTVPAVRPDV ALADGDVLDL GGRSLRVVHT PGHSPDSLCL VDDAHGVLLA GDTVVAAASW
LHGAGADLDD FARSTAALAG LPLRRVLTAH NLCAERPPSY VRSVAQTAER VRAGQSTPRP
GTDLLGNPVD RHTHDGVTLL LPPSPTSPSP TSSAAPSRTD PQTEEIA
|
|---|
| |