Gene Sked_17160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17160 
Symbol 
ID8633352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1916274 
End bp1917323 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content75% 
IMG OID 
Productnucleoside-diphosphate-sugar epimerase 
Protein accessionYP_003314477 
Protein GI269795022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.764456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.841822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTGG TGGTGGTCGG TGGGAGCGGC AATGCCGGGA CGGGAGTGCT GCGGGCCCTG 
CACGACGCAC CGGAGATCAC CGCGGTCGTC GGGGTCTCGC GTCGGCGCCC GGACCTGACG
AGCGATCCGT TCCGCGGGAC GGAGTGGGTC CAGCGGGACG TCGCGCTCGG CGACGGCACC
CGGGACGCCG CGCTGGTCGA CGACCTCGCA GGAGTCTTCG CCGGGGCCGA CGCCGTCGTG
CACCTCGCCT GGCTCATCCA GCCCAACAGG GACCGCGACC TGCTGCGGCG CACCAACGTC
GACGGGACCC GGACCGTGGC CCGCGCCGCT GCCGCTGCAG GGGTCCCGCA GCTCGTGGTC
GCGTCGTCCG TGGGGAGCTA CGCTCCCGTG CACGACGACG TCCTGCGCGA CGAGTCGTGG
AGCACCAGCG GCGTCCCCAC CTCCCACTAC AGCGTCGACA AGGTGGCCCA GGAGCGCGTG
CTCGACGACG TCGAGGCCGC ACATCCCGAG ATGGTCGTCA CCCGGCTGCG CCCCGCACTG
ATCTTCCAGC CCGAGGCCGG CGCCGAGATC GCCCGGTACT TCCTCGGGCC GCTCGTCCCG
CGCCGGGCGC TGCGACCCGG GCTCCTGCCG GTCGTCCCCT TCCCCGGCGG GCTGCGCCTG
CAGGCCGTGC ACGCCGACGA CCTCGGCCGC GCCTACCTGG CCGCCCTGCT GCACCGGGAC
CAGGCGCGCG GCGCCTTCAA CGTCGCCCAC GACCAGGTGC TCCGCGCCGA CGACGTCGCC
GCGGTCCTCG ACCACGGCAA GTCCTTCGGC GTCCCTCCGG CCGCCCTGCG CACCCTCCTG
GCGGTCGCCT ACGACCTGCG CCTGGTCCCG ACCGACCCCG GCTGGCTGGA CATGGCCATG
GGGGCTCCGC TCATGAGCAC CGAGCGGGCA CGGACACGCC TCGGCTGGCA GCCGCGGCAC
AGCGCCGCCG ACTCCCTGGC CGACCTGCTG CACGGGCTCG CGAGCGGGGA AGGGCTCGAC
AGCCCGCCGC TCCGACGGTC ACGGACCTGA
 
Protein sequence
MRVVVVGGSG NAGTGVLRAL HDAPEITAVV GVSRRRPDLT SDPFRGTEWV QRDVALGDGT 
RDAALVDDLA GVFAGADAVV HLAWLIQPNR DRDLLRRTNV DGTRTVARAA AAAGVPQLVV
ASSVGSYAPV HDDVLRDESW STSGVPTSHY SVDKVAQERV LDDVEAAHPE MVVTRLRPAL
IFQPEAGAEI ARYFLGPLVP RRALRPGLLP VVPFPGGLRL QAVHADDLGR AYLAALLHRD
QARGAFNVAH DQVLRADDVA AVLDHGKSFG VPPAALRTLL AVAYDLRLVP TDPGWLDMAM
GAPLMSTERA RTRLGWQPRH SAADSLADLL HGLASGEGLD SPPLRRSRT