Gene Sked_17130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17130 
Symbol 
ID8633349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1913195 
End bp1913896 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID 
ProductANTAR/GAF domain-containing protein 
Protein accessionYP_003314474 
Protein GI269795019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.430765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCCC AGAGCTCGGC CCAGGCTATC GCGGAGGCCA CCTCCTTGCT GGTCGCCGAC 
CATGACGTGT CTGACCTGCT GTCCCGGCTG CTCCGCGACT GCACCGCGTT CCTGCCCGTG
GTCGGGGCCG GCATCCTCGT GCGGGACGTC ACCGGCAACC TCGAGCTGCT CAGCACGACC
TCGCACACCG CCACCCAGCT CGAGATCTAC CAGGAGCTGC ACGAGTCCGG ACCGTGCGTC
GAGGTGATCG CCGAGGGCGT GGCGCTGTCC GTGGTCGGTG CCGACGCTCT CGTGGACCGC
TGGCCCGTGG TGGGCGAGCT GTTCACACGC TCGGGCATCA CCGCCGCGCA CGCCTTCCCC
ATGGTCTGGC GCGGCAAGGC CATCGGTGGT CTCAACCTGT TCAGCACCAC TCCACAGCGG
CTCACCGCCG ACGAGCGTGT CCTCGCGCAG AGCCTGGCCG ACCTCGCGAC CATCGCGCTC
GCGCGCAGCG GCGTGCTCTC GGACGACGAC CTGCACGAGC GCATCCAGAG CGTCCTCGAG
CAGCGGGTCG TCGTCGAGCA GGCGAAGGGC GTGGTCGCGG TCGTCGAGGA CATCGACCTC
GGCGAGGCCT TCGACCGTCT GGTCGCCCTC TCCGACGCGC GCGGCGAGAC GCTCGCGCAG
GTCGCGGCCG AGGTCATCGC CTCCGCGCAG CACCGGGCCT GA
 
Protein sequence
MKPQSSAQAI AEATSLLVAD HDVSDLLSRL LRDCTAFLPV VGAGILVRDV TGNLELLSTT 
SHTATQLEIY QELHESGPCV EVIAEGVALS VVGADALVDR WPVVGELFTR SGITAAHAFP
MVWRGKAIGG LNLFSTTPQR LTADERVLAQ SLADLATIAL ARSGVLSDDD LHERIQSVLE
QRVVVEQAKG VVAVVEDIDL GEAFDRLVAL SDARGETLAQ VAAEVIASAQ HRA