| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_17010 |
|---|
| Symbol | |
|---|
| ID | 8633337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1897656 |
|---|
| End bp | 1898183 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | predicted transcriptional regulator |
|---|
| Protein accession | YP_003314462 |
|---|
| Protein GI | 269795007 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.491454 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGACC TCACCGAGCC CCGAGACCGG GCCGAGCTCG AGCCCTGGTT CGTCGAGCGG
TACGCGCAGT ACTGGTCGTC GCAGGGCCTG TCCGCCATCG AGGGACGTAT GGTCGGGTTC
CTGCTGCTGA GCGACCGCCC CGTGTCGGCC GACGAGCTCG CGGCGGCGTC GGGCGCGAGC
CGCGGGTCCG TCTCGACGTA CACGCGCAGG TTGATCGACA TCGGGTTCCT GCGCCGGGTC
CGCCGCCCCG GGGACCGGTC GCACTACTTC GTCATGGACG CCGACGTGTG GGGCGGGTTC
CTCGACAACG AGCACGCCTA CCTGGTCAGG CAGCGCGAGC TCGCGAGCAC AGCCCTCGCC
CTCATGCCGC CGACCGGTCC CGCGCACGAG CGCATCCGGA ACATGCACGG GTACATGGAG
TGGCTGCTCG GGTACTACGG GACGCTGCGC TCCGAGTGGG CGCGGCACAA GGAAGGGCTC
GAGGGGCCGG GGCTGACCGA GACGGACGAA GGTCCGCCCC GGCCCTGA
|
|---|
| Protein sequence | MPDLTEPRDR AELEPWFVER YAQYWSSQGL SAIEGRMVGF LLLSDRPVSA DELAAASGAS
RGSVSTYTRR LIDIGFLRRV RRPGDRSHYF VMDADVWGGF LDNEHAYLVR QRELASTALA
LMPPTGPAHE RIRNMHGYME WLLGYYGTLR SEWARHKEGL EGPGLTETDE GPPRP
|
|---|
| |