| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_16950 |
|---|
| Symbol | |
|---|
| ID | 8633331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 1891303 |
|---|
| End bp | 1893114 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | allophanate hydrolase |
|---|
| Protein accession | YP_003314456 |
|---|
| Protein GI | 269795001 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.905265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.473581 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCG TGACCGACCT GACCGAGGCG CCGACCGCGA GCGTCGGCGA CGCCCTCCCC
GCCGCGACCC TGCCCGACGG CCCCTGCGTC CGCCGGGTGC TCGCCGCCTT CGAGGCCCTC
GAGGCCGCCG ACCGCCCGGA CGTGTGGACG CACGTGCGCC CCGTCGAGGA CGTCGTCGCC
GAGGCGGCTG CTCTCGACGC CCGGGTGGCG TCGGGCGAGG ATCTCCCGCT CGCCGGGACC
GTGCTCGGCG TCAAGGACAA CATCGACGTC GCCGGGCTGC CGACCACGGC CGCGCACCCC
GCCTTCGCCC GGGTCCCCGC CCGCTCGGCG ACCGTCGTCG CGCAGCTCGT GGCGGCCGGC
GCCCTCGTGC TCGGCAAGAC GAACCTCGAC CAGTTCGCGA CCGGGCTCAC CGGCTCGCGC
AGCCCGTACG GCGTGGTGCG CAGCGCCGTC GTCACCGACC GGGTGTCCGG CGGCTCGTCC
TCCGGCTCGG CCGTCGCCGT CGCGCTCGGC ATCGTCGACG CGGCGCTCGG CACCGACACG
GCCGGGTCGG GGCGCGTCCC GGCGGCCTTC AACGGACTGG TCGGGATCAA GCCGACGCTC
GGCCTCGTCC CCAAGGACGG CGTGGTCCCG GCCTGCGAGT CCTTCGACTG CGTCACCGTG
CTCGCCCCGA CGCTCACGAC GGCCCAGACC GTCCTGGCGC ACATGACCGC CGTGAGCCCG
CTCGACCCGT CGTCGCGGAC CTGGCCCGCC GACGCGCCGC TCGCCGCTCC GGCCGCAGCA
CGGGTCGCAG TCCCCCGGGA CGAGGACCTC CTGCGGCTGT CCCCCGAGGC CCGGACCCGG
TTCGAGGAGG CACGTGCCCG GCTCGAGGCC ACCGGCGCCA CGACCGAGGC GATCGACCTC
ACCCCGTTCC TCCGGGCGGC GACGCTGCTC TACGACGGCG GGCTCGTCGC CGAGCGCTAC
GCGGCCTTCG GCGAGTTCGT CGCGGCGCAC CCGGAGCAGG CCGACCCGAC GGTCGCACGG
ATCGCCGCCG CCGCCGGTGA GGTCACCGCC GCGCAGTACC TCGCCGCCCA GGCCGCCCTC
GCGGCCTACC GGCTCGAGGC GATGGCGACG CTCGACGGCT TCGACGCGCT CCTCGCCCCG
ACCGCCCCCG AGCACCCGAC GGTGGCAGCC GTGGCGGCCG ACCCGCTGGG CACGAACGCC
CGCCTCGGCA CCTACACGAA CTTCGTCAAC CTGTTCGACA TGGCGGGCGT GGCCGTGCCG
GCCGGCGAGG CCGACGGCGG GCTGTTCGGC GTGAGCGTCC TCGTCCGGGC CTTCGACGAC
CAGGTCGCGA TCGACCTCGC CGCCCGGCTG GTCAGCTTCG GCGCTGACGG CGCTGACGGC
ACGGACGCCC CGCCCGCTGC GTACCCCACG ACCGGCACGA GCCTGGTGGT CTTCGGTGCT
CACCTCACCG GCGAGCCCCT CAACACGGAC CTCGTCGCGC TGGGCGCCCG GTACGTCGGA
CCGGTGACGA CCGCCCCCGA GTACCGGATG CACGCGCTCG ACACCACCCC CGCGAAGCCC
CTGCTCGCAG CGGTGGCGCC GGGCACCGGG ACCCGGATCG CCGGCGAGGA GTGGCTGGTC
ACCCCGCACG CCCTCGGGCA GCTGCTCCTG ACCGTCCCCC GCCCGCTCGC CCTCGGCGCC
GTCACCCTCG ACGACGGACG CGACGTCACC GGCTTCGTCG GCTCCCTCCC CACCACCGGC
GAGCCTCCGG CAGACATCTC CCACCACGGC AGCTGGCGCA CCTACCGCGC CTCCCTCAAC
CCCCTCACGT AA
|
|---|
| Protein sequence | MTPVTDLTEA PTASVGDALP AATLPDGPCV RRVLAAFEAL EAADRPDVWT HVRPVEDVVA
EAAALDARVA SGEDLPLAGT VLGVKDNIDV AGLPTTAAHP AFARVPARSA TVVAQLVAAG
ALVLGKTNLD QFATGLTGSR SPYGVVRSAV VTDRVSGGSS SGSAVAVALG IVDAALGTDT
AGSGRVPAAF NGLVGIKPTL GLVPKDGVVP ACESFDCVTV LAPTLTTAQT VLAHMTAVSP
LDPSSRTWPA DAPLAAPAAA RVAVPRDEDL LRLSPEARTR FEEARARLEA TGATTEAIDL
TPFLRAATLL YDGGLVAERY AAFGEFVAAH PEQADPTVAR IAAAAGEVTA AQYLAAQAAL
AAYRLEAMAT LDGFDALLAP TAPEHPTVAA VAADPLGTNA RLGTYTNFVN LFDMAGVAVP
AGEADGGLFG VSVLVRAFDD QVAIDLAARL VSFGADGADG TDAPPAAYPT TGTSLVVFGA
HLTGEPLNTD LVALGARYVG PVTTAPEYRM HALDTTPAKP LLAAVAPGTG TRIAGEEWLV
TPHALGQLLL TVPRPLALGA VTLDDGRDVT GFVGSLPTTG EPPADISHHG SWRTYRASLN
PLT
|
|---|
| |