Gene Sked_16920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_16920 
Symbol 
ID8633328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1888325 
End bp1889134 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
Protein accessionYP_003314453 
Protein GI269794998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.407228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.132168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCA TCGGAACCAT CCGTCCCACC CGTCCCGCCG ACATCGAGGT CCGTGACCTC 
GGCAAGCGCT ACGGCCGCGC CGGCTCGGGC ATCTTCGCCA TGGACGACGT CGACCTCACC
GTCCCCGCCG GGGAGTTCGT GTGCGTCGTC GGCGCGAGCG GTTGTGGCAA GAGCACGCTG
CTGCGCATCC TCGCCGGCTT CGAGCCCGCC ACCAAGGGCA CGGTGACCGT CGCCGGCGAG
GCCGTGTCGA AGCCCGACCC CGAGCGGGGA GTCGTCTTCC AGGACTACGG GCTGTTCCCG
TGGCTCTCGG TGAGCGAGAA CATCGCCTAC GGACCGCGCC AGGCCCGGCT CCCCCGCGAC
GTGGTCCGCG AGCGCACCAC CCGGTTCCTC GAGGCGGTGG GGCTCACACG CTTCGCGGCG
AAGTTCCCGC ACGAGCTCTC GGGCGGCATG CAGCAGCGCG TGGCGATCGC CCGGGTGCTG
GCCAACGACC CGTCGGTCAT GCTCATGGAC GAGCCCTTCG GCGCGCTCGA CGCGCTGACG
CGCTCGTCGC TCCAGGCGGA GCTGTCCAAG ATCCACCGCG AGACGGGCAC GACGGTCGTG
TTCGTCACGC ACTCCATCGA GGAGGCGGTG TTCCTCGCGG ACCGTGTCGT GGTGATGGCC
GGCGGAGCGT CGCACGGTGT CCCCGGGCAC ATCCGGGAGA TCGTGCCGAT CGGCCTCGGG
GCGGACCGGG ACGTGACGTC GCCGGAGTTC AACGAGCTCA AGCGGCACAT CTCGGCGCTG
GTCCACCAGG GGGTGGAGGT CGCGGCCTGA
 
Protein sequence
MPRIGTIRPT RPADIEVRDL GKRYGRAGSG IFAMDDVDLT VPAGEFVCVV GASGCGKSTL 
LRILAGFEPA TKGTVTVAGE AVSKPDPERG VVFQDYGLFP WLSVSENIAY GPRQARLPRD
VVRERTTRFL EAVGLTRFAA KFPHELSGGM QQRVAIARVL ANDPSVMLMD EPFGALDALT
RSSLQAELSK IHRETGTTVV FVTHSIEEAV FLADRVVVMA GGASHGVPGH IREIVPIGLG
ADRDVTSPEF NELKRHISAL VHQGVEVAA