Gene Sked_16840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_16840 
Symbol 
ID8633320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1881789 
End bp1882559 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID 
Productshort-chain dehydrogenase, teichoic and lipoteichoic acid D-alanine esterification 
Protein accessionYP_003314446 
Protein GI269794991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0203884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA CCACGAGCAC AGTCTTCATC CCCGGCGCCA CGAGCGGCAT CGGGCTCGCC 
CTCGCCCTCC GGCTGCAGGC CCGGGGCAGC ACCGTCGTCG TCGGAGGACG ACGCACCGAC
CTGCTCGAGC GCATCGCCGT CGAGCACCCC GGCATCGGCA CCGTGCAGGT CGACACCGCC
GACCCGGCGA GCATCACCAG GGCGGCCGCC GAGGTGCTGG CCGCCTACCC CCGGCTCGAC
ACCCTCGTCA CGATGGCGGG CATCATGCGC TCCGAGGACT GGCTCTCCCC CGGGACCTTC
CTCGCCGACG CCGAGGCGAC GGTCACGACC AACCTGCTCG GCCCGATCCG CCTGGTCGCC
GCGTTCCTCG AGCACCTGCG GACCCGCCCG GACGCGACCA TCGTCACGGT GTCGAGCGGC
CTGGCGCACG TGCCGCTGCG CGTGACCCCG ACCTACAACG CCACCAAGGC CGCCGTCCAC
ATGCTCAGCG AGTCCCTCCG TCTCCAGCTG GCGGGGACGA GCGTCTCCGT GCTCGAGCTC
GTCCCGCCGG CCGTGCAGAC CGACCTCATG CCCGGCCAGG CCGAGAACCC CGTCGCGATG
CCGCTCGACG CCTTCGTCGA CGAGGTCGTC ACCCTGCTCG AGACGCAGTC CGACGCCCAC
GAGGTCCTCG TCGAGACCGT GGGCTTCCTG CGGTTCGCCG AGGTCCGCGG CCAGTACGAC
GAGGTGGTGG CGACGCTCAA CAGCACCGAC CGCCACGCGT CGGCCGAGTG A
 
Protein sequence
MDITTSTVFI PGATSGIGLA LALRLQARGS TVVVGGRRTD LLERIAVEHP GIGTVQVDTA 
DPASITRAAA EVLAAYPRLD TLVTMAGIMR SEDWLSPGTF LADAEATVTT NLLGPIRLVA
AFLEHLRTRP DATIVTVSSG LAHVPLRVTP TYNATKAAVH MLSESLRLQL AGTSVSVLEL
VPPAVQTDLM PGQAENPVAM PLDAFVDEVV TLLETQSDAH EVLVETVGFL RFAEVRGQYD
EVVATLNSTD RHASAE