| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_16360 |
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| Symbol | |
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| ID | 8633272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 1835526 |
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| End bp | 1837703 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_003314405 |
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| Protein GI | 269794950 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0365172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGAA CGACCTCGAC CCAGACGCAC GACACCTCTG CGCACGACGC CCCGACGAAC
AGCGAGGCCC AGCCTCGCGG CGAGCGCGTC ACGCGATCCC TGGTCCGCGA CGTGACGCTC
CCGAGCGGCG GCACCCTCGC CCTCGTCACC CTCGACAACG GCCTGGACCA CACCAAGCCC
TCGACCCTCG GTCCGCTCGG CCTCGCCGAG CTGCACACCG CCCTGAGAGC CGTCACCGAG
CGTGCTGCCC GTGGCGAGAT CGTCGCGGCC GCCGTGACCG GCAAGCCCTT CGTGCTCGCC
GCCGGGGCCG ACCTCACGGC CGCGAGCGCC GTCACCACCC GCGACGACGC GAGGGCGCTG
GGCAGCGCGG GCCACGCGGC CTACCGGCTG CTGCAGGAGA TGGCCGTCCC CACCTTCGCC
TTCGTCAACG GCGTCGCGCT CGGCGGCGGC CTCGAGCTGG CCCTGGCGTG CACCTATCGC
ACGGTTGCGA CGGACGTGCC CGCGATCGCG CTCCCGGAGA CCTCCCTCGG GCTGGTCCCG
GGGTGGGGCG GCTGCTTCCG GCTGCCCCGG ATCGTGGGGA TCGAGAAGGC GATCGACGTC
ATCCTCACGC GTCCCGCGGC GAACAAGCCC TTCACCGGCC CGCAGGCCTA CGAGGCGGGC
ATCGCCGACG CTCTCCTGGA CTCTGCGGAC TTCCTCGAGC AGTCGATCGT GTGGGCCGAT
GCGGTGCTGC GTGGCGAGAT CACCGTGGAG CGTCCCGACC TGGCGCCCGC GGAGGTCTGG
CAGGCGACGG TCGACGGCGC ACGCGCACGG GTCGACGCGC TGCTCCACGG CTCGCGCCCG
GCCCCCTACC GGGCTCTCGA CCTGCTCGCT GCGGCCCGGG ACTCCGACCC GGACACGGCG
TACTCGGCGG AAGACGACGC GCTCGCCGAC CTCATCATGA GCGACGAGAT GCGGGCGTCG
GTGTACGCCT TCCAGACCGT CAACCGGGCG AAGAAGCCGG TCGGCGCCCC GGCACGCGAC
CTGGCTCGGC CGGTCACGCA GGTGGGGATC GTGGGTGCCG GGCTCATGGC CGCCCAGCTC
GCCCTGCTCT TCGCACAGCG CCTCGGAGTC CCCGTGGTGA TGCGCGACCT CGACGACGAG
CGTGTGCAGC ACGGCCTCGA CCACGTCCGC GCGACCGTCG AGAAGCTCGT GTCGACCGGG
CGGGTGCCCG CCGAGAAGGG CGCGGCGATC GCCGCCGGCA TCCGCGGGAC CACGGTGCTC
GACGACCTGT CCGGGTGCGA CTTCGTCATC GAGGCCGTCA CCGAGGTGCT CGGCCTCAAG
AAGAAGGTCT TCGCCGAGCT CGAGGGCATC GTCTCCCCCG AGACGATCCT GGCGACCAAC
ACCTCCGCGC TGTCGGTCAC GCAGATGGCC GAGGGTCTCG AGCACCCGGA GCGCGTGGTC
GGGCTGCACT TCTTCAACCC GGTGGCGCAG ATGCCGCTCG TCGAGGTGGT GCGGGCGGAG
CGTTCGTCCG ACGAGGCCGT CGCCACGGCC TTCGCCGTCG CGAAGACCCT GCGCAAGACG
GCGGTACTGG TCCGGGACCG TCCGGGCTTC GTGGTCAACC GGCTGCTCGT GCTGCTGCTC
GGCGAGATCG TCGACGTGGT CGAGGCCGGC ACGCCGGTCG AGGTGGCTGA CAGGGCGCTG
CGCCCGCTCG GGCTCCCCAT GGGACCCTTC GCGCTCTTCG ACCTCGTGGG GCCTGCCGTC
GGCCTGCACG TGCTGACGTC GCTGCGTGAG GACCTGGGCG ACAGGTTCCC CGCCTCCCCC
GCGCTCGAGA AGATCGTGGC GGAGAAGGTC CCTGTGGTCC TGCCGTCGCC CGCTCGCGGT
GTCCCCGCTA CGGTCGACCC GGCGCTGCAG GCCGTCTTCG ACGAGGTGCG CGACCCAGGA
CGGGACCAGG TGGTCCTCGA CGAGGCCGGT GTCCTCGACC GGGTGCTGCG CACGCTGGCC
CGGGAGGTCG GGCTCATGCT CGACGAGGGC GTGGTGTCCG AGGCGTCGCA GATCGACCTC
TGCATGATCC TCGGGGCGGG CTGGCCCTTC AGCGCCGGCG GGATCTCCCC GTACCTCGAC
CGGGCAGGCG TGTCGGAGTC GGTCCTGGAC CGACGGCTGC TGCCGGACGG CGTCGCGAAC
GTCCCGTCGC AGGCCTGA
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| Protein sequence | MTGTTSTQTH DTSAHDAPTN SEAQPRGERV TRSLVRDVTL PSGGTLALVT LDNGLDHTKP
STLGPLGLAE LHTALRAVTE RAARGEIVAA AVTGKPFVLA AGADLTAASA VTTRDDARAL
GSAGHAAYRL LQEMAVPTFA FVNGVALGGG LELALACTYR TVATDVPAIA LPETSLGLVP
GWGGCFRLPR IVGIEKAIDV ILTRPAANKP FTGPQAYEAG IADALLDSAD FLEQSIVWAD
AVLRGEITVE RPDLAPAEVW QATVDGARAR VDALLHGSRP APYRALDLLA AARDSDPDTA
YSAEDDALAD LIMSDEMRAS VYAFQTVNRA KKPVGAPARD LARPVTQVGI VGAGLMAAQL
ALLFAQRLGV PVVMRDLDDE RVQHGLDHVR ATVEKLVSTG RVPAEKGAAI AAGIRGTTVL
DDLSGCDFVI EAVTEVLGLK KKVFAELEGI VSPETILATN TSALSVTQMA EGLEHPERVV
GLHFFNPVAQ MPLVEVVRAE RSSDEAVATA FAVAKTLRKT AVLVRDRPGF VVNRLLVLLL
GEIVDVVEAG TPVEVADRAL RPLGLPMGPF ALFDLVGPAV GLHVLTSLRE DLGDRFPASP
ALEKIVAEKV PVVLPSPARG VPATVDPALQ AVFDEVRDPG RDQVVLDEAG VLDRVLRTLA
REVGLMLDEG VVSEASQIDL CMILGAGWPF SAGGISPYLD RAGVSESVLD RRLLPDGVAN
VPSQA
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