Gene Sked_16310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_16310 
Symbol 
ID8633267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1828030 
End bp1829484 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content72% 
IMG OID 
ProductIMP dehydrogenase family protein 
Protein accessionYP_003314400 
Protein GI269794945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.130696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTCT TGGACGGACA GACCCCCACG ACCGACCTGA CCTACGGGGA CGTGTTCCTC 
GTCCCCGGCC GGTCCGAGGT CACCTCACGA TTCGACGTCG ACCTCTCGAG CACCGACGGG
ACCGGCACCA CCATCCCGCT CGTCGTCGCC AACATGACGG CCGTCGCCGG CCGCCGCATG
GCCGAGACCA CGGCCCGCCG CGGTGGCATC ACCGTGATCC CGCAGGACAT CCCGACCGAC
GTCGTCGCCG ACGTGGTCGC GAGCGTCAAG GCGAAGGACC CCGTCGTGGA GTCGCCCGTC
GTGGTGTCCC CCCACGACAC CGTGCACACC GCGCTCACGC TCATCGGCAA GCGCTCCCAC
GGCGCCGCGG TCGTCGTGGA CGGCGACCGC CCCGTCGGCG TCATCACCGC CTCCGACTGC
ACCGGTGTCG ACCGCTTCAC CCAGGTCCAC CAGGTGATGT CCGCCAACCC CACGTCGATC
GACGCGCAGG TCCTCGAGGC TGCCGGCGCC GACGGCCTGC GTCGCGCCTT CGACCAGCTG
CACGAGTCGC GCCGCAAGCT CGCGCCCGTC GTCCGCGACG GCCGCCTCGT GGGCGTCCTC
ACCCGCACCG GCGCGCTGCG CTCGAGCATC TACGACCCGG CGCTCGACGG GAGCGGCCGC
CTGCGTGTCG CGGCCGCCGT AGGGATCAAC GGCGACGTCG CGGCCAAGAC CGAGGAGCTC
CTCGCCGCCG GCGTCGACGT CCTCGTGGTC GACACCGCCC ACGGGCACCA GTCGAAGATG
ATCGCGGCCC TCAGGGCCGT CCGGTCCGTG TCGCCCAAGG TCCCCGTGGT CGCGGGCAAC
ATCGTCACCG CCGAGGGCGT CGAGGACCTC GTCGAGGCCG GGGCCGACAT CATCAAGGTC
GGCGTGGGCC CGGGCGCCAT GTGCACCACC CGCATGATGA CCGGTGTCGG TCGCCCGCAG
TTCTCCGCCG TCCTCGAGTG CGCCACGAAG GCCACCGAGC TCGGCAAGCA CGTGTGGGCT
GACGGCGGCG TCCGCCACCC GCGCGACGTA GCCCTCGCCC TCGCGGCTGG CGCCTCGCAG
GTGATGATCG GCTCGTGGTT CGCCGGCACG CACGAGAGCC CCGGCGACCT CCACGACGAC
GGCAACGGCC GCCTGTACAA GGAGAGCTTC GGCATGGCCT CGGCCCGCGC CGTGGCCGCA
CGCACCGCCG GTGGCTCGCC CTTCGACCGG GCTCGCAAGT CGCTCTTCGA GGAGGGCATC
TCGTCGTCGC GCATGTACAT CGACCCGAAG CGTCCCGGGG TCGAGGACCT CATCGACGAG
ATCACGTCGG GCCTGCGCTC CTCGTGCACC TACGCGGGCG CCACGAGCCT CGCCGAGTTC
GCCGAGCGTG CCGTCGTCGG GATCCAGTCC GCCGCCGGCT ACGAAGAGGG CCGTCCGCTC
CCCGCCGGCT GGTGA
 
Protein sequence
MRFLDGQTPT TDLTYGDVFL VPGRSEVTSR FDVDLSSTDG TGTTIPLVVA NMTAVAGRRM 
AETTARRGGI TVIPQDIPTD VVADVVASVK AKDPVVESPV VVSPHDTVHT ALTLIGKRSH
GAAVVVDGDR PVGVITASDC TGVDRFTQVH QVMSANPTSI DAQVLEAAGA DGLRRAFDQL
HESRRKLAPV VRDGRLVGVL TRTGALRSSI YDPALDGSGR LRVAAAVGIN GDVAAKTEEL
LAAGVDVLVV DTAHGHQSKM IAALRAVRSV SPKVPVVAGN IVTAEGVEDL VEAGADIIKV
GVGPGAMCTT RMMTGVGRPQ FSAVLECATK ATELGKHVWA DGGVRHPRDV ALALAAGASQ
VMIGSWFAGT HESPGDLHDD GNGRLYKESF GMASARAVAA RTAGGSPFDR ARKSLFEEGI
SSSRMYIDPK RPGVEDLIDE ITSGLRSSCT YAGATSLAEF AERAVVGIQS AAGYEEGRPL
PAGW