Gene Sked_16170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_16170 
Symbol 
ID8633253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1809861 
End bp1810526 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID 
ProductK+ transport system, NAD-binding component 
Protein accessionYP_003314386 
Protein GI269794931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.11506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACTTCG TCATCATGGG ATGTGGGCGC GTCGGCGCCA CTCTGGCCCA GTCGCTCGAG 
AGCTACGGCC ACTCCGTCGC GGTCATCGAC CAGAACGCCG AGGCGTTCCG TCGGCTGAAC
GCCGACTTCG GCGGCAAGAA GGTGACAGGG CTCGGCTTCG ACCGGGACAC CCTGCACCAG
GCGGGCATCG ACGACACCTT CGGCTTCGCC GCGGTGTCGG ACGGCGACAA CTCGAACATC
CTCGCCGCCC GCGTGGTCCG TGAGACCTAC GGCATCGAGA ACGTCGTCGC CCGGATCTAC
GACCCGCACC GCGCCGAGAT CTACCAGCGC CTGGGCATCT CGACGGTCGC GACGGTCCGG
TGGACCGCCG ACCAGATGCT CCGCCGCATG CTCCCCATGG GGGCGACCGA CGAGTACCGC
GACCCCTCCG GCCAGATCCG TCTCGCCCAG GTGGACGTCC ACCCGGGCTG GTACGGCCGG
TCGATCCGGG CGATCGACGA GGCGAGCGGC GCGAAGTCGG CCTTCGTCAC CCGCTACGGC
GACGGGCTCA TCGTGCACCC CGAGACCGTG CTGCAGGAGA ACGACATCCT GCACGTGCTG
GTCCACACGG ACGCGTCCTC CACGATGGAG CGCATCCTCA CCCACGCACC ACAGCTGGAG
GCCTGA
 
Protein sequence
MHFVIMGCGR VGATLAQSLE SYGHSVAVID QNAEAFRRLN ADFGGKKVTG LGFDRDTLHQ 
AGIDDTFGFA AVSDGDNSNI LAARVVRETY GIENVVARIY DPHRAEIYQR LGISTVATVR
WTADQMLRRM LPMGATDEYR DPSGQIRLAQ VDVHPGWYGR SIRAIDEASG AKSAFVTRYG
DGLIVHPETV LQENDILHVL VHTDASSTME RILTHAPQLE A