Gene Sked_16130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_16130 
Symbol 
ID8633249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand+ 
Start bp1807257 
End bp1808003 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314382 
Protein GI269794927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.173695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.154271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCTGT TCCGACGCGG ACCCAAGGGG ACCGGTGCGA GCGCACCCGC CCCGGGGACC 
GAGACCGACT CCGCCGAGGC GCAGGACGGT GCCGAGACGA CCTCCGAGGC AGGCTCGTCC 
GACACGGTGA CCGACGCTGC CGGTGCAGAG GGGCCCTTCG ACGTCTCCGA CGTCCCCGAG 
CTCGGCGCGC GCGTCGACCT CGGCGCGATC CGGGTGCCTG GTGTCAGCGG CATGGAGCTG 
CGCATGGAGG TCGACCAGAA GACCAACCGG GTGACCGGGG CCGGGCTCTC CGTCGAGGGT 
TCCGCGCTGC AGGTCCAGGC CTTCGCGGCG CCGCGCACCG ACGGCATCTG GGACGAGATC 
CGCGCCGAGA TCGCCGAGTC GATCGTCAAG CAGGGTGGCT CCGTCGACGA CGTCCCCGGG 
CCTTTCGGGC GCGAGCTCCT CGCCCGCCTG CCCGCGCGGA CGGCCGACGG CCGCACCGGT 
CACCGCCCGG CGCGCTTCAT CGGGCACGAC GGCCCGCGCT GGTTCCTCCG CGGCGTCATC 
AGCGGCAAGG CGGCGGTGGA CGTCGAGGAG GCCAAGACCC TCGAGTCGCT CTTCCGGCAG 
ATCGTCGTGG TGCGCGGTGA CGACGCCCGC CCCCCGCGCG ACCTCCTCTC GCTCACGCTG 
CCCGGCAAGC GCCCCGCCGA GCCCGTCGTG GCGCCCCCCA CCTTCGACCC GCTGACCCGC 
GGTCCCGAGA TCACCGAGAT CCGCTGA
 
Protein sequence
MALFRRGPKG TGASAPAPGT ETDSAEAQDG AETTSEAGSS DTVTDAAGAE GPFDVSDVPE 
LGARVDLGAI RVPGVSGMEL RMEVDQKTNR VTGAGLSVEG SALQVQAFAA PRTDGIWDEI 
RAEIAESIVK QGGSVDDVPG PFGRELLARL PARTADGRTG HRPARFIGHD GPRWFLRGVI 
SGKAAVDVEE AKTLESLFRQ IVVVRGDDAR PPRDLLSLTL PGKRPAEPVV APPTFDPLTR 
GPEITEIR