| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_16080 |
|---|
| Symbol | |
|---|
| ID | 8633244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 1803196 |
|---|
| End bp | 1804335 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003314377 |
|---|
| Protein GI | 269794922 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.330616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.383381 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAGC AGAGTGCAGG TGAGCTGCGT CTCGTCGGGC TGGACGACGA CGGGGAGCAC
CTCGTGCTGT CGCGCCCCGG TGGCGAGACG TTCCGGCTGG CGATCACGGA CGGGCTCCGT
GCTGCCGTGC GCCGAGACCG TCCGCGCCTC GAGCACCTCA AGACGCAGGA GCGGGGCTTC
CTGGCGCCGC GAGAGATCCA GGCGCGGGTC CGTTCGGGCC TGACCGCCGA GGAGATCGCC
GCAGAGGCGG GCATCACCGT CGAGCAGGTC CGTCGCTATG AGGGCCCCGT GCTCGCCGAG
CGACAGTTCA TCGCGCAGCA GGCGGCCGCC ACCCGTGTGG GCCGTGACAG CAGCTCGCCG
AGCCTGGGCG ACCTCGTCAC GGACCGGCTC GCCGCACGTG GCGTCGAGAC GTCGGGGCTG
GAGTGGGACG CCTCGCGGCC CGACGGCCAC GGCTGGATCG TCTCCGTCGC GTTCAGCGTC
GGAGGCCAGG ACCGCCTGGC CCGGTGGACC TTCGACCCGC CGGCCCGGTC GCTGCACGCC
CTCGAGGACG AGGCACGCTG GCTCTCGGAG ACCGAGATCG CCGACGAGCC CATCCCCCGT
CGCCACCTCG CGTCGGTGCG CTCCTCGGTG TACGACCTCG ACTCGGACGG GTCCGTGCGG
CCGGTGCTCG ACGCCGTCGA CCTCGACCCG CGCCTGCTCC CCGTCCCGGA GCAGCAGGAG
ACGCCGAGCG AGCTCGACCA GACGGCAGCG ATCCTCGACG ACCTCCAGGG TCGACGCGGT
GTCCGCCAGC AGATGGAGCT CGGCGAGGAG GACTCCCTCT TCGAGGGTTT CGGCCCGCCC
GCAGCCTTCG GCGACGACGC GCACGAGCCC GCTGGTGACG TCCCCGGCGC ACACCCGGCC
GAGCCCGCGA GCGGGCTGCA GGAGGCACGC GTCTATGCGC TGCCCCCGCT CTCGCTGCCG
GCCGACGCGC CGGACGCGGA CGAGACGCCC GTGGCGCTGG CCCCCGATGC AGAGATCCCC
GCGGCGGAGG AGACCTCGAC CGAGGCCCCT GCCGAGAAGT CGCCGGCACG CCCCGCGCGA
CGTGGACGCT CGAAGGTCCC CAGCTGGGAC GAGATCGTCT TCGGCGGCAA GCAGGACTGA
|
|---|
| Protein sequence | MVEQSAGELR LVGLDDDGEH LVLSRPGGET FRLAITDGLR AAVRRDRPRL EHLKTQERGF
LAPREIQARV RSGLTAEEIA AEAGITVEQV RRYEGPVLAE RQFIAQQAAA TRVGRDSSSP
SLGDLVTDRL AARGVETSGL EWDASRPDGH GWIVSVAFSV GGQDRLARWT FDPPARSLHA
LEDEARWLSE TEIADEPIPR RHLASVRSSV YDLDSDGSVR PVLDAVDLDP RLLPVPEQQE
TPSELDQTAA ILDDLQGRRG VRQQMELGEE DSLFEGFGPP AAFGDDAHEP AGDVPGAHPA
EPASGLQEAR VYALPPLSLP ADAPDADETP VALAPDAEIP AAEETSTEAP AEKSPARPAR
RGRSKVPSWD EIVFGGKQD
|
|---|
| |