Gene Sked_16000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_16000 
Symbol 
ID8633236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1789253 
End bp1790179 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content75% 
IMG OID 
Productputative homoserine kinase type II (protein kinase fold) 
Protein accessionYP_003314369 
Protein GI269794914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.20971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGGGG GCGCGGTGCC GACCGGGGCG ACCGCGCTGC GGCCCCGGTG GTCCTCGCTG 
CCGGTCGGCG TGCGCGAGGC CGTCGAGTCC CGGCTCGGCG CCCTGGTGGT CGAGGCCCGG
TCGCAGGACT CCGGCTTCAC GCCGGGTCTG GCGTCGCGCC TGCTCCTCGC CGACGGGCGC
CGGGTGTTCG TCAAGGCCGC GTCGTCCGAG ACCGCGTCCT GGGTGGTCGA CGCCTACCGG
CGTGAGTGCG AGGTCACGGC GGGCCTGCCC GCCGGTGTGC ACGCCCCGCG AGCGCTCTGG
ACCCTCGAGC ACGGCCCGTG GTTCGTCGCT GTGATGGAGG ACGTCGAGGG GCAGCACCCG
CGGCGGCCCT GGCAGGAGGA CGAGCTCGAC CTCGTGCTGG CGATGCTCAC CGAGAACGCC
CGGCTGCTCA CGCCCCCGCC CCCGGGGCTG GTCGTCCCGC TGCTCGCCGA CGAGCTCGCC
ACGGAGCTCG ACCTGGTCCG CAGGCTCGAG CCGCCCTGGC GCGACACCTG CGTCGGGCTC
GCCGAGCGGA TGCTTGCCTC CCCCGCGACC ACCGTCGTCC ACACGGACGT CCGCGACGAC
AACGTGCTCC TGACGGACAG CGGCGCGGTG GCCGTCGACT GGAACTTCGT CGCGGCGGGT
CCTGCCTGGT TCGACATGGT CTCGCTGCTC GTCCAGGCGC ACGGCGACGG CGTCGACGCG
GACGCGCTGC TCGCCCGGGA GCCGCTCACC CGGGACGTCG ACCCGGACCT CGTGGACGGC
GTGCTGGCGT TGCTGCTCGG GTACCTCACC TGGGCGGCCG CGCAGGACCA CGTCGAGACC
TCGCCGTACC TGCGCGCCCA CCAGGCCTGG TACCGGGACG CTAGCCGGTC CTGGTTGTCG
AGGCGTCGCG GGTGGTCTCT GGGCTGA
 
Protein sequence
MRGGAVPTGA TALRPRWSSL PVGVREAVES RLGALVVEAR SQDSGFTPGL ASRLLLADGR 
RVFVKAASSE TASWVVDAYR RECEVTAGLP AGVHAPRALW TLEHGPWFVA VMEDVEGQHP
RRPWQEDELD LVLAMLTENA RLLTPPPPGL VVPLLADELA TELDLVRRLE PPWRDTCVGL
AERMLASPAT TVVHTDVRDD NVLLTDSGAV AVDWNFVAAG PAWFDMVSLL VQAHGDGVDA
DALLAREPLT RDVDPDLVDG VLALLLGYLT WAAAQDHVET SPYLRAHQAW YRDASRSWLS
RRRGWSLG