Gene Sked_15970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_15970 
Symbol 
ID8633233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1786548 
End bp1787399 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314366 
Protein GI269794911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.354169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.289981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGCA GCGGGGCGAC GCACGGACGC GTCGGCGCGG ACCCGCTGGT CCACCCCGGC 
GCAGGCCCGC TGGTGGCGCG CTGGGCCTCC GGCGCGCTGC TCGTCGTGAC GAGCCTGCTC
GGCCTGGCGA TGTTCTCCTG GCCTCTCGTG GCCAGCGTCC TGCCGAGGTC CTCCGAGCAG
GGTGCCCCGT GGCTGCTCGT CGTGCTGCTG CCGGTCCTCC TGGTCCTGCT GCTGGTCCAG
CTGACCGGTG GAGAGCTCGA CCCCAGGACC CTCGCGCTGC TCGGCGTGCT GTCGGCGGTG
AACGCCGCCC TGCGCCTGCT CAGCGCCGGG ACCGGGGGCA TCGAGCTGGT CTTCTTCCTG
CTGGTCCTCT CGGGCTACGT CCTCGGCCCG ACCTTCGGGT TCCTGCTCGG GACGGTGTCG
CTGGCCGCGT CGGCGCTGGT GACCGCCGGC GTCGGCCCCT GGCTGCCCTT CCAGATGATG
GCCGCCGGGT GGATCGGGCT CGGCGCGGGT CTGCTCGGAC GTGCGCTCGC CGGCAGGGTC
CGGCCCCGGG GGTGGGCGGA GATCGGCGCG CTCGCGGTCT ACGCGGCACT GGTCGCCTAT
CTCTTCGGCG CCCTGATGAA CCTGTGGTTC TGGCCCTTCG CGATCGGCGG CGACACCTCG
GTGTCGTACG TCCCCGGCGG GGACCTCGGC GAGAACCTGC GGCGCTTCGC CGTCTTCACG
CTCACGACGT CGACCCCGAC GTGGGACACG GTGCGGGCCG TCACCAACGT CGTCGCCGTG
CTCCTGCTCG GGCGCCCCGT ACTCGGGACG CTGCGCCGCG CGCAGCGCCG CGGTGTGCTC
GCGCGTAGCT GA
 
Protein sequence
MTRSGATHGR VGADPLVHPG AGPLVARWAS GALLVVTSLL GLAMFSWPLV ASVLPRSSEQ 
GAPWLLVVLL PVLLVLLLVQ LTGGELDPRT LALLGVLSAV NAALRLLSAG TGGIELVFFL
LVLSGYVLGP TFGFLLGTVS LAASALVTAG VGPWLPFQMM AAGWIGLGAG LLGRALAGRV
RPRGWAEIGA LAVYAALVAY LFGALMNLWF WPFAIGGDTS VSYVPGGDLG ENLRRFAVFT
LTTSTPTWDT VRAVTNVVAV LLLGRPVLGT LRRAQRRGVL ARS