Gene Sked_15940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_15940 
Symbol 
ID8633230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1783032 
End bp1783808 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content77% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314363 
Protein GI269794908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.329369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.311733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTGC TCGCCCTCGC GGCCGCGGTC GGCACGGCTC TCCTGGTGAG CGCCGCAGCG 
CCGGCGACGC CCGGGGCCGT CCCGACCCCG TGCGACGGCG TGGCCGTGGT CGTCGACGGC
GGTGCGCTGG ACGCAGGTGC GCTCGACGGC GGTGCCCCAG GCAGTGTCTC GCCCGGCGTG
CTGAGTGCTC TCGGCTGCGC GGACGTCGAC GTCTCGGTCA CCGCCCACGA CGCCGCGACG
GTGGCCGGGG TCGAGCTGGA GGGCACGCAG CAGTGGGGTG CGGCGTTCGT GTGCCGCGTG
GACGGCCGCC CGGCGGTCGA CGAGGGGCTG CGGCGCGCCG ACGGGAGCGT CGGTACGGAG
CCGTGCCTCC GTACCCCGTC ACAGGGGGCG TACTGGGCGC TGTGGACCTC CTCCGGGGGA
TCGGCGTGGG TCTATGCGGA CCAGGGAGCG ACGACGCTGG AGGTCGGCCC AGGCGACGCG
GTCGGTCTCG TCTTCGTGAC CTCTGACAGG CCCGAGCCGC CGCGTGTCGC GCCTGCCGAG
TCGCTCGCCG GCCTTGCCCC GACGGGCTGG AGGGCCGACG GCGCGTCGAC GGCCACCGGT
ACGGTCCACG GCGAGGCATC GGAGCCCGTC GATGGGGCGA CTGGTGGGAC CGACGCTGAC
GGCCCCGGTG GCCCCGGCGG CCCCGGCGGC CCGGGTGGGG TGGCGCTCGT CGGTCTCGGT
CTGGCGGCCG CCCTGCTCGC CCTCGCCGTC CTGCGGTCAC GGGCGCGACG ACTGTGA
 
Protein sequence
MDVLALAAAV GTALLVSAAA PATPGAVPTP CDGVAVVVDG GALDAGALDG GAPGSVSPGV 
LSALGCADVD VSVTAHDAAT VAGVELEGTQ QWGAAFVCRV DGRPAVDEGL RRADGSVGTE
PCLRTPSQGA YWALWTSSGG SAWVYADQGA TTLEVGPGDA VGLVFVTSDR PEPPRVAPAE
SLAGLAPTGW RADGASTATG TVHGEASEPV DGATGGTDAD GPGGPGGPGG PGGVALVGLG
LAAALLALAV LRSRARRL