Gene Sked_15820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_15820 
Symbol 
ID8633218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1768016 
End bp1770181 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content72% 
IMG OID 
Productserine/threonine protein kinase 
Protein accessionYP_003314351 
Protein GI269794896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0718778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGATG GACTCGTCGG CCGGCTGGTC GACGGGCGCT ACGAGGTGCT CGAACGCATC 
GCGCGCGGCG GGATGGCGAC CGTGTACCTC GCGACCGACC GTCGCCTCGA CCGCGAGGTG
GCGGTCAAGG TCATGCACCC GCACCTGGCC GACGGAGCCT CCGGGGCCGA CTTCGTGTCC
CGGTTCCGCC GCGAGGCACG CGCCGCCGCC CGGCTGACCC ACCCCGGTCT GGTGGCCGTC
TACGACCAGG GTGTCGACGG CGAGACCAGC TACCTCACGA TGGAGTACAT CGACGGGACG
AACCTGCGGC ACCGCCTGCA GGACGAGGGG CCCTTCACCG TCGGCGAGGC CCTCGACGTC
GTCGAGCACG TCCTCGACGC GCTCGCCGCT GCCCACCGCC ACGACCTGGT GCACCGCGAC
ATCAAGCCCG AGAACATCCT GCTGGCCACC GACGGGCGGA TCAAGGTCGC AGACTTCGGG
CTGGCCCGCG CCGTCACCGA GGTGACCTCG ACCGCCACGG GCACCATCCT GGGCACCGTC
GCGTACCTGG GCCCCGAGCT CATCGCGACC GGGCAGTGCG ACACCCGGAC CGACGTGTAC
GCCGTCGGCG TGATGCTCTT CGAGATGCTC ACCGGGGCCC CGCCCTTCAC CGGGGCGACC
CCCATCCAGG TGGCCTTCCA GCACGTCAAC AGCTCCGTCC CGGCTCCGTC GACCATGGTG
CCCTGGCTCC CGGTCGAGGT CGACGAGCTC ACGTGCGCCC TCGCAGCGAG GACTCCCGAC
GACCGCCCCG TCGACGCGAC CGCAGCGCTC GCCTACCTCC GGCGGGTCCG CGCAGAGCTG
GACGGCGACA TGCTCGGACG CCGCGCCGAC CGGCCGGCCA GCCCAGCGGC AGAGACACCT
GCAGCCTCTG GCGCAGATGA CGGTCCTGAC TCCGACGACC ACGACTCCGC CGACCTGTCA
GCACTGCTCA CCGCGACCGG TGCGACCGGC CCGGCGCGCG CCCCGTCACC GGAGCCCTCG
GAGCCGCCGA CCGTCGGCAG CGTCGTCGGC ACGGTCAGCA CCGCCCACCT CACCGGTCGC
GGCAGCGACA GGACCGGCAG CGCAGAGACT GCGACCGTCC GACCGCCGCG CGCCGAGAGC
CACACCCAGC AGGCCGAGAA CCTCACCCAG TCGCTGTCCC ACGTCGGGCA CGGCTCGACC
ATCGCCCTGA CCATCGGTGC CGGCGAGCTC GACCAGGAGA GCCCCGAGGA CGACCGCCCG
CGCGTCCGCC GCCGCCGACG CGCGCTGCTG TGGACGCTGC TGGTCGTGCT GCTCCTCGGC
GGCGGCGGCG CGGCCGCGAC CTCGTGGTGG TTCTCTTCTG GCCCTGGCCA CTACACCGAG
GTCCCGGCGG GTCTCGTCGC GGTCCCGGCC GACGACGCCG TCACCGCCCT CACCACCGCG
GGCCTCGGGT CGAGCACCAC CGAGGCCTTC AGCGACACCG TCCCCGAAGG GACCGTCGTC
GACGCACGCC CTGCCGAGGG CGACAGGATC CCCAAGGACG GCTCCGTCGA GCTCGTCGTC
TCCCAGGGCA TCGAGACCTT CGTCGTCCCC GAAGGCCTGA CGAACATCCC GTCGGCCGAT
GCCGAGGCAG CGCTGCGCTC GACCGGCTTC ACGCAGATCA CCGGCGAGGA GCAGTGGAGC
ACGGACGTCC CGGTCGGCGT CGTGCTCAGC CTGTCCGTCG CGGAGGGCGC CACGCTCCCC
CACAACGAGC CTGTCGTCCT CACCATCTCC AAGGGCCCCG AGCCCGTCAC CGTGCCCTCC
GTGGTCTCCC TGACGCTGGA CGAGGCCACC GAGCAGCTCG CGGCCCTCGA CATCTCGGTC
GTCACCGAGG AGGCGTACGA CGAGAACGTC CCCGAAGGTG CCGTCGTCTC GCAGAGCATC
GAGGACGGTG CCGAGTCGCA GCGCGGCGCC GAGATCACCC TCACCGTCTC CCTCGGGCTG
CCTTTCGTCA CGGTCCCCGA CGTCATCGCC AAGCCGGTGG CAGAGGCCAA GGCCGAGCTC
GAGGACGCGG GCTTCACCGT CGACGTCGTC TACTGGCTGG GCGTCTTCGG CAACGAGGTC
CGTTCGCAGA GCAGCGACCC GGGCACCCAG CTGCGCCAGG GCTCGACGAT CACGCTGCGG
CTCTGA
 
Protein sequence
MTDGLVGRLV DGRYEVLERI ARGGMATVYL ATDRRLDREV AVKVMHPHLA DGASGADFVS 
RFRREARAAA RLTHPGLVAV YDQGVDGETS YLTMEYIDGT NLRHRLQDEG PFTVGEALDV
VEHVLDALAA AHRHDLVHRD IKPENILLAT DGRIKVADFG LARAVTEVTS TATGTILGTV
AYLGPELIAT GQCDTRTDVY AVGVMLFEML TGAPPFTGAT PIQVAFQHVN SSVPAPSTMV
PWLPVEVDEL TCALAARTPD DRPVDATAAL AYLRRVRAEL DGDMLGRRAD RPASPAAETP
AASGADDGPD SDDHDSADLS ALLTATGATG PARAPSPEPS EPPTVGSVVG TVSTAHLTGR
GSDRTGSAET ATVRPPRAES HTQQAENLTQ SLSHVGHGST IALTIGAGEL DQESPEDDRP
RVRRRRRALL WTLLVVLLLG GGGAAATSWW FSSGPGHYTE VPAGLVAVPA DDAVTALTTA
GLGSSTTEAF SDTVPEGTVV DARPAEGDRI PKDGSVELVV SQGIETFVVP EGLTNIPSAD
AEAALRSTGF TQITGEEQWS TDVPVGVVLS LSVAEGATLP HNEPVVLTIS KGPEPVTVPS
VVSLTLDEAT EQLAALDISV VTEEAYDENV PEGAVVSQSI EDGAESQRGA EITLTVSLGL
PFVTVPDVIA KPVAEAKAEL EDAGFTVDVV YWLGVFGNEV RSQSSDPGTQ LRQGSTITLR
L