Gene Sked_15540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_15540 
Symbol 
ID8633190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1738220 
End bp1739233 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content69% 
IMG OID 
Productpredicted oxidoreductase, aryl-alcohol dehydrogenase like protein 
Protein accessionYP_003314323 
Protein GI269794868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.457096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAACT ATCGATACCT CGGCAACTCC GGCCTCAAGA TCTCGGAGAT CACCTACGGC 
AACTGGCTCA CCCACGGCTC GCAGGTCGAG AACGACGCGG CGACCGCCTG CGTCCGCGCG
GCGCTCGACG CCGGCATCTC CACCTTCGAC ACCGCGGACG TCTACGCGAA CACCAAGGCC
GAGCAGGTGC TCGGCGACGC GCTCAAGGGC GAGCGTCGCG AGTCCCTCGA GATCTTCACC
AAGGTCTACT GGCCCACCGG CCCCGGCGGG CCCAACGACA CCGGGCTCTC GCGCAAGCAC
ATCATGGAGT CGATCGACGG GTCCCTCACC CGCCTCGGCA CCGACTACGT CGACCTCTAC
CAGGCGCACC GCTACGACAC CGAGACGCCG CTCGAGGAGA CCATGCAGGC CTTCGCGGAC
ATCGTCCGCC AGGGCAAGGC GCTCTACATC GGCGTGAGCG AGTGGACCGC CGACCAGATC
CGCGCCGGCC ACGCCCTCTC CAAGGAGCTC GGCTTCCAGC TCATCTCCTC GCAGCCGCAG
TACTCGATGC TGTGGCGCGT CATCGAGGAA GAGGTCGTCC CGACCTCGGC CGAGCTCGGC
ATCTCCCAGA TCGTCTGGTC CCCCGTGGCC CAGGGAGTCC TCACCGGCAA GTACGCCCCC
GGGGCCGAGC TCCCCGCCGG GTCGCGCGCC ACCGACGAGA AGGGCGGCGC GAACATGATC
AAGCGCTTCC TCGACGACGA CGTCCTGCGC CGCGTGCAGG AGCTCAAGCC CGTCGCCGAC
GAGCTCGACC TCTCGCTCGC CCAGCTCGCG GTCGCCTGGG TCCTCCAGAA CGACAACGTC
GCCGCCGCAC TCATCGGTGC CTCGCGCCCC GAGCAGGTGG CGGAGAACGT CAAGGCCTCG
GGAGTCGTCA TCCCCGAAGA GCTGCTGACC AAGATCGACA CGATCCTCGG CGGCGTCGTC
GAGCGCGACC CGGGCAAGAC GGCAGAGACC GCCCCCAAGG GCCGCGTCGC CTGA
 
Protein sequence
MVNYRYLGNS GLKISEITYG NWLTHGSQVE NDAATACVRA ALDAGISTFD TADVYANTKA 
EQVLGDALKG ERRESLEIFT KVYWPTGPGG PNDTGLSRKH IMESIDGSLT RLGTDYVDLY
QAHRYDTETP LEETMQAFAD IVRQGKALYI GVSEWTADQI RAGHALSKEL GFQLISSQPQ
YSMLWRVIEE EVVPTSAELG ISQIVWSPVA QGVLTGKYAP GAELPAGSRA TDEKGGANMI
KRFLDDDVLR RVQELKPVAD ELDLSLAQLA VAWVLQNDNV AAALIGASRP EQVAENVKAS
GVVIPEELLT KIDTILGGVV ERDPGKTAET APKGRVA