Gene Sked_15330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_15330 
Symbol 
ID8633169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1716681 
End bp1717781 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content71% 
IMG OID 
Productmycothiol-dependent formaldehyde dehydrogenase 
Protein accessionYP_003314302 
Protein GI269794847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGG TCAGAGCCGT CATCGCCCGA GCCAAGGGCG CGCCGGTCGA GCTCGTCACC 
ATCAACGTCC CCGACCCCGG GCCCGGTGAG GCCGTCGTGG CCGTCCAGGC CTGCGGGGTG
TGCCACACCG ACCTGCACTA CCAGCAGGGT GGCATCAACG ACGAGTTCCC GTTCCTGCTC
GGCCACGAGG CCGCGGGCAT CGTCGAGGCC GTCGGAGAGG GCGTCACCGA GGTGGCCCCC
GGCGACTTCG TCGTCCTCAA CTGGCGCGCC GTGTGCGGCG AGTGCCGTGC GTGCAAGCGC
GGCGAGCAGC AGTACTGCTT CAACACCGCC AACGCCACGC AGAAGATGAC CCTCGAGGAC
GGCACCGAGC TCACGCCGGC CCTCGGCATC GGCGCCTTCG CCGACAAGAC GCTCGTCGCG
GCCGGGCAGT GCACCAAGGT CGACCCGTCG GCCCGTCCCG CCGCCGTGGG CCTCCTCGGC
TGTGGCGTCA TGGCCGGCAT CGGTGCGGCC ATCAACACCG GCGGCGCCAC CCGCGGCAAG
TCCGTCGCCG TCATCGGCTG CGGTGGCGTC GGCGTGGCCG CCGTCGCCGG TGCCGCGCTC
GCCGGCTCGA GCCCGATCAT CGCCGTGGAC ATCGACCCCA AGAAGCTCGA GACCGCGAAG
AAGCTCGGCG CGACGCACAC CGTCGACTCG TCCAAGGTCG ACCCGGTCGA GGCCATCCGC
GAGATCTCCG CGAAGACCTA CCCCGGCGCC GAGGGCGCCG ACATCGTCAT CGAGGCCGTC
GGTCGCCCCG AGACGTGGAA GCAGGCGTTC TACGCCCGCG ACCTCGCCGG GACGGTCGTC
CTCGTCGGGG TGCCCACCGC AGGCATGATG GTCCCCGAGC TCCCCCTCAC CGACGTCTTC
GGCCGCGGCG GCTCGCTCAA GTCCAGCTGG TACGGCGACT GCCTGCCCAG CCGCGACTTC
CCGATGCTCG TCGACCTGTA CCAGCAGGGT CGCCTCGACC TCGACGCCTT CGTCACCGAG
GAGATCAGCA TCGACGGCGT CGAGGCCGCC TTCGAGCGGA TGCACGGCGG CGACGTCCTG
CGATCGGTCG TGGTGCTCTG A
 
Protein sequence
MQQVRAVIAR AKGAPVELVT INVPDPGPGE AVVAVQACGV CHTDLHYQQG GINDEFPFLL 
GHEAAGIVEA VGEGVTEVAP GDFVVLNWRA VCGECRACKR GEQQYCFNTA NATQKMTLED
GTELTPALGI GAFADKTLVA AGQCTKVDPS ARPAAVGLLG CGVMAGIGAA INTGGATRGK
SVAVIGCGGV GVAAVAGAAL AGSSPIIAVD IDPKKLETAK KLGATHTVDS SKVDPVEAIR
EISAKTYPGA EGADIVIEAV GRPETWKQAF YARDLAGTVV LVGVPTAGMM VPELPLTDVF
GRGGSLKSSW YGDCLPSRDF PMLVDLYQQG RLDLDAFVTE EISIDGVEAA FERMHGGDVL
RSVVVL