Gene Sked_15160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_15160 
Symbol 
ID8633152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1699569 
End bp1701020 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content72% 
IMG OID 
Productpurine-cytosine permease-like transporter 
Protein accessionYP_003314285 
Protein GI269794830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.280122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAG ACACCCGCAC GACGAGGACG CGCGCGCTCG GCGCCGTCGA GCAGCGCGGC 
ATCGAGCCCG TGCCCGTCGC CGAGCGCACC GGCAACCCGC TCCAGCTGTT CTGGGTGTGG
TTCGCCGCGA ACATCTCCGT GCTCGGCCTG CCGCTCGGCG TCGCGCTCGT CGCGAGCGGG
CTCGCGATCT GGCAGGCGGT GCTCGTCGCC GTCCTGGGCG CCTTCGGCTC CTTCGCGATC
GTCGGGCTCA TCTCGATCGC GGGACGCCGT GGCGGGGCAC CCAGCCTGAC CCTGTCCCGC
GCGACCTTCG GGGTCCGCGG CAACATCGGC CCGACCGCGG TGGCCCTGTG CTCACGGCTG
GGCTGGGAGA CCGTCAACAC CGCGACCGCC GCCCTGGCCT TCGTGACCAT GTGCTCCCTC
GTCGCGGGTA CCGGGTCGGG CGCCAAGGAC GTCCCCGTGC TCACCGTCGT CGGGGTCGCG
CTGTTCGTCG CGTGCACGGT CGCGGTGTCG GGCATGGGCC ACGCCTTCAT CCTCGTGGTG
CAGAAGTGGG CCACCTGGAT CTTCGGGGCG ATCAACCTCC TGGTCATCGG GTTCCTCGTG
GTGAACGTCG ACTGGTCGCT CGTGCTCGAC ACCCCCACCG GCAGCGTCGC CGCCGTCCTC
ACCGGGATCG GGACCATCGC GGCCGGCACC GGCATCGGCT GGGCCAACTC CGGCGCGGAC
ATGGCGCGCT ACCAGGCGCC GCGGGTCAAG GCCAGCGCGC TGGTGGCCTC TGCGGCCGCA
GGCGCCGGCA TCCCGCTCGT CCTGATGATC TCGATGGGGT CGCTGCTCGG GGCCTCGGAC
TCCCAGGTGC TCGGTGCGTC GAACCCCATG GACGCCATCC GCGACACCCT GCCGTCGGGC
ATGGCGGTCG TCTACCTCGT GGTGTCCTTC GTGGGGCTCC TGCTGTCCAA CCACCTGTCC
GTCTACTCGG CCGGCCTCAC CACCATCACC CTGGGGATCC GCCTGCCGCG CGTCTACGCG
GTGATCGTCG ACGTGGTCGT CACCACCGTC GCGTCCCTGT GCTTCCTGCT GCTCGCCGAC
GGCTTCTACG GCCCCTTCAT CACCTTCATC TCGCTGCTCG CGGTCCCGAT CGTCGCCTGG
GTCGGGGTGT TCTGCGTCGA CATGATCGGG CGCACGAGCT ACGACGGCGA CGCCCTGCTC
GACCTCAGCC CGCGCTCGGG CTACTGGTAC CGCGGCGGCA TCGAGTGGCG CGCCTTCGGC
TCGTGGCTGC TGGCCATCGT CGTCGGCGCG CTGTTCCTGC AGGTCCAGCC CGGAGAGGCC
GTCTGGTACA CCGGGCCGCT GCACGACTCG TGGGTGGGGC AGAACGGGCT CGCCTGGGTG
GTGACCGCGG TGGTCGCGGC CGGCGCCTAC GCTCTGGCCG GCGGCGCTCG ACGCCAGGAG
CGCGTCCGAT GA
 
Protein sequence
MTADTRTTRT RALGAVEQRG IEPVPVAERT GNPLQLFWVW FAANISVLGL PLGVALVASG 
LAIWQAVLVA VLGAFGSFAI VGLISIAGRR GGAPSLTLSR ATFGVRGNIG PTAVALCSRL
GWETVNTATA ALAFVTMCSL VAGTGSGAKD VPVLTVVGVA LFVACTVAVS GMGHAFILVV
QKWATWIFGA INLLVIGFLV VNVDWSLVLD TPTGSVAAVL TGIGTIAAGT GIGWANSGAD
MARYQAPRVK ASALVASAAA GAGIPLVLMI SMGSLLGASD SQVLGASNPM DAIRDTLPSG
MAVVYLVVSF VGLLLSNHLS VYSAGLTTIT LGIRLPRVYA VIVDVVVTTV ASLCFLLLAD
GFYGPFITFI SLLAVPIVAW VGVFCVDMIG RTSYDGDALL DLSPRSGYWY RGGIEWRAFG
SWLLAIVVGA LFLQVQPGEA VWYTGPLHDS WVGQNGLAWV VTAVVAAGAY ALAGGARRQE
RVR