Gene Sked_15080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_15080 
Symbol 
ID8633144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1691479 
End bp1692303 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content65% 
IMG OID 
ProductABC-type sugar transport system, permease component 
Protein accessionYP_003314278 
Protein GI269794823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.316794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGC GCAAGGCCGG GGCGGTCCTC CTCCACGCGA CGCTCCTCGG GCTCGGGCTG 
CTCACCGTCG CCCCCTTCGT CTGGATGGCG CTGTCGGCCT TCAAGACGAA CGCCGAGATC
AACAGCCTCG ACCAGACGCT GCTCCCGCGG GAGTGGACCA TCGAGAACTT CGTCAACCTC
CAGGAGACCT TCGACATCCT GCGGCTGTTC TCGAACTCGG TCCTGCTCTC CGTGACCATC
ACCAGCATCG TGGTCTACAC GAGCGCGCTC GCGGGCTTCG TGCTGGTGAA GTACGAGTTC
CGCGGGCGGA CCGCGATCTT CGCCTTCGTC CTCGGCACGA TGATGATCCC CTGGGCGGTG
ACCATCATCC CGAGGTACAC GATGTTCGTC GCGGTCGGGC TGCAGGACTC GTACCTGTCG
CTCGTCATCC CCGCAGCGCT GAGCGGGTTC GGCATCTTCA TGATGCGCCA GAGCATGGGG
GCGGTACCCG ACGAGGTCCT CGAGGCGGCC CGGCTGGACG GCGCGTCGGA GACCTACGTG
TTCCACAGGA TCGTGCTGCC GATGAGCGTC AACGCCATCT CGGCGCTCTC GATCTTCCAG
TTCTTGTGGG TGTGGGAGGA CTACCTCTGG CCGTACCTCA TGATCAACAG CCCGGAGAAG
CAGGTGCTGG CCGTCGGGCT CACGACGTTC AGCGGTCGCT ACGGCACCGA CTACGGAGGG
TTGTTCGCGG CGACGACGCT CTCGATCATC CCCGTGATCG TCGTCTACGT GATCTTCCAG
CGGCGGTTCG TGGCCGGGGC GGCGAGCGCC GCGGTCAAGG GGTAG
 
Protein sequence
MIARKAGAVL LHATLLGLGL LTVAPFVWMA LSAFKTNAEI NSLDQTLLPR EWTIENFVNL 
QETFDILRLF SNSVLLSVTI TSIVVYTSAL AGFVLVKYEF RGRTAIFAFV LGTMMIPWAV
TIIPRYTMFV AVGLQDSYLS LVIPAALSGF GIFMMRQSMG AVPDEVLEAA RLDGASETYV
FHRIVLPMSV NAISALSIFQ FLWVWEDYLW PYLMINSPEK QVLAVGLTTF SGRYGTDYGG
LFAATTLSII PVIVVYVIFQ RRFVAGAASA AVKG