Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_15080 |
Symbol | |
ID | 8633144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1691479 |
End bp | 1692303 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | ABC-type sugar transport system, permease component |
Protein accession | YP_003314278 |
Protein GI | 269794823 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.316794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCGC GCAAGGCCGG GGCGGTCCTC CTCCACGCGA CGCTCCTCGG GCTCGGGCTG CTCACCGTCG CCCCCTTCGT CTGGATGGCG CTGTCGGCCT TCAAGACGAA CGCCGAGATC AACAGCCTCG ACCAGACGCT GCTCCCGCGG GAGTGGACCA TCGAGAACTT CGTCAACCTC CAGGAGACCT TCGACATCCT GCGGCTGTTC TCGAACTCGG TCCTGCTCTC CGTGACCATC ACCAGCATCG TGGTCTACAC GAGCGCGCTC GCGGGCTTCG TGCTGGTGAA GTACGAGTTC CGCGGGCGGA CCGCGATCTT CGCCTTCGTC CTCGGCACGA TGATGATCCC CTGGGCGGTG ACCATCATCC CGAGGTACAC GATGTTCGTC GCGGTCGGGC TGCAGGACTC GTACCTGTCG CTCGTCATCC CCGCAGCGCT GAGCGGGTTC GGCATCTTCA TGATGCGCCA GAGCATGGGG GCGGTACCCG ACGAGGTCCT CGAGGCGGCC CGGCTGGACG GCGCGTCGGA GACCTACGTG TTCCACAGGA TCGTGCTGCC GATGAGCGTC AACGCCATCT CGGCGCTCTC GATCTTCCAG TTCTTGTGGG TGTGGGAGGA CTACCTCTGG CCGTACCTCA TGATCAACAG CCCGGAGAAG CAGGTGCTGG CCGTCGGGCT CACGACGTTC AGCGGTCGCT ACGGCACCGA CTACGGAGGG TTGTTCGCGG CGACGACGCT CTCGATCATC CCCGTGATCG TCGTCTACGT GATCTTCCAG CGGCGGTTCG TGGCCGGGGC GGCGAGCGCC GCGGTCAAGG GGTAG
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Protein sequence | MIARKAGAVL LHATLLGLGL LTVAPFVWMA LSAFKTNAEI NSLDQTLLPR EWTIENFVNL QETFDILRLF SNSVLLSVTI TSIVVYTSAL AGFVLVKYEF RGRTAIFAFV LGTMMIPWAV TIIPRYTMFV AVGLQDSYLS LVIPAALSGF GIFMMRQSMG AVPDEVLEAA RLDGASETYV FHRIVLPMSV NAISALSIFQ FLWVWEDYLW PYLMINSPEK QVLAVGLTTF SGRYGTDYGG LFAATTLSII PVIVVYVIFQ RRFVAGAASA AVKG
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