Gene Sked_14920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_14920 
Symbol 
ID8633128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1676362 
End bp1677459 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content72% 
IMG OID 
Productpredicted membrane protein/domain protein 
Protein accessionYP_003314262 
Protein GI269794807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0445754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0682409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACCG ACGACGCACA CCTCACCCGT GTCCCCGAGA CCGTCGCCAA GGTGCACTAC 
GCGTCGTGGA CCGCGCGCGT CGTCGCGGCC GTGATCGACG GCTTCGCCTT CAGCGGGATC
GTCTTCCTCG TCGCCGGTCC GGTCATCACC GACACGAACA TCGCCATCCC GCTGCTCGCC
CTCAACGACC TCGACATGTC GGTGGTCCCC GCCGCCGCAC GGTGGTCGAT CGTCGGGGTC
TGGCTCGCGT TCATGCTCGT GCAGGGCCTC GGCGGCGCGA CCCTCGGCAA GCGCGTCGTC
GGGATCGCCG TCGTGAGCCG CGAGTCCGGC CGCCCGATCG GGCTCCTCGG CTCGGTCCTG
CGGTGGTTCG CGCACCTCGC CGACGTGATC CTGCTCATCG GGTACCTCAG GCCGCTCTGG
GACGCCGAGC GCCGCACCTT CGCGGACTCG ATCCTCGGCA CCGTCGTGCT GCAGACCCGC
ACGGTCCGGC CCAACCGTCT CGTCGAGCGG CTGCTGCAGC GTCGCCGAGG GCTGTCGTCA
CCAACGGTCG AGGAGCGCCG GACCTTCGGC GACCCCGACA CGGGCCCGTG GGGGCGGACG
CTGACCGCGC TCGCGACGGT GCTCGCCCTG CTCTTCGCCG CGCTCGCCGT GAGCGTGCAG
TCGTCAGGAG GTCAGACCTC GACCCAGTGC GCCTTCGGCG ACGGCACGTC GTCGACCTTC
GAGCCGCTCT CGGTGTCGAT ACGCAGCGAG GGCGGTGTGC GGACAGAGCG CCGACTCGGC
ATCGAGAGGT CGGTGTCCAC GCCGGACGGC AGGATCGACG CCGACTGGGC ATGGACCGGA
GAGGCGCCTG ACGGCACGTC CGTCGAGCTC GTCGCGACCT CCGCCGACGG CACGGAGATC
CGTCGCACGG CCTTCGTCCC GGCCGGGTCC GTCTCGGACG AGTGGCTCGA CGGCGACGGT
CCCGGGCTGC CCGGCAGAGG CGCCGGGACG GTCGAGATCG ACGGCCACGA CCTCGCCTCC
CTCGGCGGCT CCTGGACCGC GACCACCACG ATCTCCGTGG ACGACGAGCC CGTGGGGTCC
TGCACCCTCA GCCGCTGA
 
Protein sequence
MVTDDAHLTR VPETVAKVHY ASWTARVVAA VIDGFAFSGI VFLVAGPVIT DTNIAIPLLA 
LNDLDMSVVP AAARWSIVGV WLAFMLVQGL GGATLGKRVV GIAVVSRESG RPIGLLGSVL
RWFAHLADVI LLIGYLRPLW DAERRTFADS ILGTVVLQTR TVRPNRLVER LLQRRRGLSS
PTVEERRTFG DPDTGPWGRT LTALATVLAL LFAALAVSVQ SSGGQTSTQC AFGDGTSSTF
EPLSVSIRSE GGVRTERRLG IERSVSTPDG RIDADWAWTG EAPDGTSVEL VATSADGTEI
RRTAFVPAGS VSDEWLDGDG PGLPGRGAGT VEIDGHDLAS LGGSWTATTT ISVDDEPVGS
CTLSR