Gene Sked_14890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_14890 
Symbol 
ID8633125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1673876 
End bp1674490 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003314259 
Protein GI269794804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0325223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0343336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCCG CTGCCCCACG CCCGACCGCG ACCCGAGAGC CGGACGCGCG ACCACCCGAC 
GCACGCCGAG CCGACGCACG CCGCAACCGC GAGGCGATCC TCGCCAGCGC GCTCGAGCTC
TTCGCACGAG ACCCGAACGC CTCCATGTCG GCGATCGCCA CGGCTGCCGG CGTCGGCCGG
GTCACGCTGT ACGGGCACTT CGCGGGACGC GACGAGCTCG TCGAGGCAGC CCTCGCCACG
GCCGTCGAGC AGTCGGACGC GCTGCTCGCG ACCCTCGACC TGTCCGGCGA CCCGATCGAC
GCGCTCACCC GGCTCGTCGG CCAGTCGTGG CGGCAGGTCG AGGCCAACAG CGCGGCGCTC
GACGCCGCCC TCGCCGCCCT CGGCGAGGAG CACGTGCGCT CGTCGCACGA CGCCGTGCTG
ACCCGCGTCC ACGAGCTCGT CGAGCGCGGC CAGGCGTCAG GCGCGTTCCG GGCGGACCTC
AGCGCGGACT GGCTGACGGC CGTCGTCTAC TCGACCCTGC ACACCGCGTG CGCCGAGGTC
GCCGGAGGGC GCCTCGGACC GGACGAGGCC GAGCAGGCCA TCGTCGCCAC GGTCACGAGC
GCGGTACGCG GCTAG
 
Protein sequence
MTPAAPRPTA TREPDARPPD ARRADARRNR EAILASALEL FARDPNASMS AIATAAGVGR 
VTLYGHFAGR DELVEAALAT AVEQSDALLA TLDLSGDPID ALTRLVGQSW RQVEANSAAL
DAALAALGEE HVRSSHDAVL TRVHELVERG QASGAFRADL SADWLTAVVY STLHTACAEV
AGGRLGPDEA EQAIVATVTS AVRG