| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_14870 |
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| Symbol | |
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| ID | 8633123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 1670469 |
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| End bp | 1673219 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_003314257 |
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| Protein GI | 269794802 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.44593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0967933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCAC CACGACGACG CCTCCCCCTG AGGCTCGCGG CGGCAGCGAC GGCAGGCGCC
GTGCTCCTCA CGCCCCTCGT CACCACCTCC GCCGTCGCAG CCGACGACCC GACGGGACCG
GTCGAGGCCG GGATCGTCGT CGACAAGGTG GAGGGCCTCC CCGAGGACTT CATCAACGGC
GTCGACATCT CGTCGATCCT CGCCCTCGAG AAGAGCGGCG TGACCTTCCA GGACTGGGAC
GGCCAGCAGG CCGACATCTT CGAGGTGCTC GCCGACGCGG ACGTCAACTA CGTCCGCGTC
CGCGTGTGGA ACGACCCCTA CGACGCCCAG GGCAACGGCT ACGGCGGCGG CGACAACGAC
ATCGCGGCAG CCGTCGCGAT TGGCGAGCGC GCCACCGCGC ACGGCATGCG CCTCCTGGTC
GACTTCCACT ACTCCGACTT CTGGGCCGAC CCCGCCAAGC AGCAGGCCCC CAAAGCCTGG
GCCGAGATGA CCGTCGACCA GAAGGCCGAC GCCACCGAGG CGTACACCGC CGACGCCCTC
ACCCAGCTGC GCGACGCGAA CGTCGACGTC GGCATGGTGC AGGTGGGCAA CGAGACCAAC
AACTCCGTCG CCGGCGTCAC CGGCTGGGCC GGGATGTCGC AGATCTTCAG CGCCGGCAGC
AGCGCCGTGC GCACCGTCTA CCCCGACGCC CTCGTCGCGG TGCACTTCAC CAACCCCGAG
CGGGCCGGCT CCTACGCGAA CATCGCCCGC CAGCTCGACA CCCACGGCGT CGACTACGAC
GTCTTCGCGA GCTCGTACTA CCCGTTCTGG CACGGGTCGC TGAGCAACCT GACGACCGTG
CTGGACCAGG TCGCGACGAC CTACGACAAG CAGGTCATGG TCGCCGAGAC GTCGTGGAAC
TACACCCTCG AGGACGGCGA CGGCCACGAG AACACCATCA AGCCGACCTC CGGGTTCACG
CAGTACCCCT CGTCCGTCCA GGGCCAGGCG ACCGCGGTCC GCGACGTCAT GCAGGCCGTC
ACCGACGTGG GCCCCGAGGG GATCGGCGTC TTCTACTGGG AGCCCGCGTG GCTGCCGGTC
GGCCCACCCG AGGAGCTCGC GCAGAACAAG CTCCTCTGGG AGGAGCACGG CTCCGGCTGG
GCGTCCAGCT ACGCCGCCGA GTACGACCCG GAGGACGCCG GCGAGTGGTA CGGCGGGTCG
TCGTGGGACA ACCAGGCGCT CTTCGACTTC CAGGGTGCAC CGCTCGAGTC GCTGCGCGTG
TTCCAGTACG CCCGCACCGG TGCGACCGCG CCGCGCGAGG TCGTCGACGT CGAGAAGGTG
ACGCTCACCG TCCCTGACGG ATCACCCGTC ACCCTTCCGG CCACGGTGCG CGTCACGTAC
AACGACGGCA GCACCGAGGA CCGACCCGTC ACGTGGTCGA CCTCCGTAGA CTGGATCCGC
GGGCCGGGGG CGTACACGGT CTCCGGGACC ACCGCCGACG GCGCGCGGGT CACCGCGACC
GTCACGGTCA GCGCGGTGAA CCACGTCGCC AACCCCAGCT TCGAGGACGC GACCGCCGCC
CCGTGGACCA TCACGGGGAC GGGGGCATCC GTCGCGGCCG ACGCCGACGC CTCCGACGGG
GCTCGCTCCC TGAAGTTCTG GTCCGCCACC CCCTACACCT TCGCGGTCGA GCAGACGATC
ACCGGCGTAC CCGCCGGCAC CTACCGGCTG TCCGCCACGA GCCAGGGCGC ACTGGCAGGC
CCGACCGACA CCCGCACCCT GAGTGCGACC ACGGCCGAGG GCGAGCAGTC GGCGCCCATC
ACCCTCGACG GCTGGCGGGC CTTCTCGACC GCGACCGTCG ACGACGTGGT CGTCGGCGAG
GACGGCCTCG TCACCGTCGC CGCGCGCTAC TCGCTCAGCG GTGCCGCCTG GGGCAACCTC
GACGACGTCC GCCTCACCCG CGTGGAGAGC ACGACGACCG TCGACACCGC CGCCCTCGAG
CAGTCGCTCC AGACGGCCCG CACCGTCGAC CGCACGCTCT GGACGCCGGC GTCGCTCGCG
ACCCTCGACG TCGCGGTCGA GAGCGCCGAG GTGCTCCTGT CCGGGTCACG GGCCACGCAG
GAGGACGTCG ACGCGGTGAC CGCGCTCGTC GACGCGGCCG TCGCCGGGCT GGAGGCGATC
GACACGACGC CCCCGGTGGA CCCTGAGCCT CCCGTGACTC CGCAGCCCCC GGTCACGCCC
GAGCCCCCGG TCACGCCGGA GCCGCCCGTC ACGCCCGAGC CCGTCACGCC GGTCATGACG
CTCAGCTCCG GGTCCGTCAC CGCGGGTGAC GACGTCACCG TCACGGTGAC GGGGCTCGAC
CTCCCCGAGG TCGAGATCGG CATCGAGAGC GAGTACCAGC GCCTCGCCTC GGCCACCGTC
GTCGACGGCG CCGCGACGGT CACCGTGACC GTCCCGGCCA CCCTCGAGGC CGGCACGCAC
AGCCTCCAGG CCCGCGACGC CGACGGCGCC GTGCTCGCCC AGGCAGCCGT CGAGGTGCTC
GCCGCGCCCG TCGCCACGCC CACGCCGGGA GAGCCGGGGA CGGATGCACC GACGACGCCT
GCACCAGGCG TCCCGTCATC AGGGGCTCCG GCAGCAGGCG GCACCGGAAC GCTCAGCGAG
ACCGGCGCCG ACGTCGCCCT CCTCGCCGGG CTGACGACGA TGCTCGTCGC GGCCGGCAGC
GCGGTGCTCG TGCTGCGTCG CCGTAGGGCC GGGACCTCGA CCCTACGGTG A
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| Protein sequence | MHPPRRRLPL RLAAAATAGA VLLTPLVTTS AVAADDPTGP VEAGIVVDKV EGLPEDFING
VDISSILALE KSGVTFQDWD GQQADIFEVL ADADVNYVRV RVWNDPYDAQ GNGYGGGDND
IAAAVAIGER ATAHGMRLLV DFHYSDFWAD PAKQQAPKAW AEMTVDQKAD ATEAYTADAL
TQLRDANVDV GMVQVGNETN NSVAGVTGWA GMSQIFSAGS SAVRTVYPDA LVAVHFTNPE
RAGSYANIAR QLDTHGVDYD VFASSYYPFW HGSLSNLTTV LDQVATTYDK QVMVAETSWN
YTLEDGDGHE NTIKPTSGFT QYPSSVQGQA TAVRDVMQAV TDVGPEGIGV FYWEPAWLPV
GPPEELAQNK LLWEEHGSGW ASSYAAEYDP EDAGEWYGGS SWDNQALFDF QGAPLESLRV
FQYARTGATA PREVVDVEKV TLTVPDGSPV TLPATVRVTY NDGSTEDRPV TWSTSVDWIR
GPGAYTVSGT TADGARVTAT VTVSAVNHVA NPSFEDATAA PWTITGTGAS VAADADASDG
ARSLKFWSAT PYTFAVEQTI TGVPAGTYRL SATSQGALAG PTDTRTLSAT TAEGEQSAPI
TLDGWRAFST ATVDDVVVGE DGLVTVAARY SLSGAAWGNL DDVRLTRVES TTTVDTAALE
QSLQTARTVD RTLWTPASLA TLDVAVESAE VLLSGSRATQ EDVDAVTALV DAAVAGLEAI
DTTPPVDPEP PVTPQPPVTP EPPVTPEPPV TPEPVTPVMT LSSGSVTAGD DVTVTVTGLD
LPEVEIGIES EYQRLASATV VDGAATVTVT VPATLEAGTH SLQARDADGA VLAQAAVEVL
AAPVATPTPG EPGTDAPTTP APGVPSSGAP AAGGTGTLSE TGADVALLAG LTTMLVAAGS
AVLVLRRRRA GTSTLR
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