Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_14850 |
Symbol | |
ID | 8633121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1668777 |
End bp | 1669451 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | transcriptional regulator |
Protein accession | YP_003314255 |
Protein GI | 269794800 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.126744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCCCC AGCCGGACCC GACCGCACCG TCGCGGCGCC CCCGCCGCCC AGGCCGACGG CGCGACGAGT CACGCGACGA GGCCATCCTC GACGCCGCCC GCGAGCTCCT CGTCGAGCGC GGCTACGAGA ACATGACCAT GGACGCCGTC GCCGAGCGCG CCGGGGCCGG CAAGGCCACG CTCTACCGCC GCTGGTCCTC CAAGACGCAG CTCACCGTCG ACGCCATCAC CTGCCACCGG TACGCCGACC TCACCGCCGA CGACATCCCC GACACCGGCT CGCTGCGCGG CGACCTGCTG AGCATCCGCC AGGTCAAGCA CCTGCGGTCC GACACCGAAG ACCTCATGAC GGGCCTCACC GCGGCGATCC GGGACGACCC GGAGGTCGCG GCCGCCTTCC AGCGCCAGTT CGTCGAGGCC CGGACCCGGC TCATGCGCGA CCTGCTCGGC CGTGCCGAGC GCCGTGGTGA GATCCCTCCG GGGCGCGACC TCGACATGAT CGCCACCGTC GCTCCCGCGA TGATCTCCTA CCAGAAGGTC ACCACCGGGA AGCCGCTCGA CCCCGAGTAC CTCGAGCGGC TCGTCGACTC CGTCCTCGTG CCGCTCGCGA CCGCTGCTCC TGGTGCCGCC GACGACGTGC GTGCCACTGC CGACGCCGGG GTGGCGGGGC GCTAG
|
Protein sequence | MDPQPDPTAP SRRPRRPGRR RDESRDEAIL DAARELLVER GYENMTMDAV AERAGAGKAT LYRRWSSKTQ LTVDAITCHR YADLTADDIP DTGSLRGDLL SIRQVKHLRS DTEDLMTGLT AAIRDDPEVA AAFQRQFVEA RTRLMRDLLG RAERRGEIPP GRDLDMIATV APAMISYQKV TTGKPLDPEY LERLVDSVLV PLATAAPGAA DDVRATADAG VAGR
|
| |