Gene Sked_14550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_14550 
Symbol 
ID8633091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1636557 
End bp1637711 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content67% 
IMG OID 
Productpredicted membrane protein 
Protein accessionYP_003314225 
Protein GI269794770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.127501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAC CTCTTGCGCC ACCTCTCCCT CAACCCGCCG ACGCCTCGAA GAAGCCTCGC 
ATCGCCTCGC TCGACGTCAT CCGTGGGCTC GCCATCCTGG GCACGCTGGC CAGCAACATC
TGGTTGTTCC AGGCGTTTTT CGGCGAGCGT GTCATCGACG TCCGATGGGC CGAGCTGCTC
TCGTGGACGT CGGAGGGCAA GTTCCTCGGA CTCCTCACCA TCATGTTCGG GATCGGTCTC
GAGATCCAAC GGCAGGCGGC GGCGAGGCGC GGCCTCCGGT GGCCGGGCAC CTATCTCGTC
CGCGCCGGCC TGCTCTTCCT CGACGGGGTC CTCAACTACA TCTTCGTCGT GCAGTTCGAC
GTCCTGCGCG TCTACGCCGT CCTCGGCTTC GTCGTGGCCT TCGTCCTGCT GATGCCCGAG
AAGCGCCAGT GGATCTTCAT CGGCGTAGCC CTCACGACAC ACGTCACGCT CATCCTCCTT
CCCTGGGCCC TGCCCGGCTT CTACGGTGCC CCCGGCTTCG TCTTCCCGGG TGAGTTCTTG
GTGGCCGAGG GGAGGCCGCC CTACGCGTAC GAGATCCACA ACAACGCTCT GACGGTGCTG
AGCGACCTGA CCGTCGGCAG CGACACCGGC TCGATCTTCA CCCTGGGTCT CGTGTGCTTC
ACGCTCGGTG CCCTGGTGTA CCGCCACGGG ATCCTCGAGG CCCGAGGATC CCGCCTGCGT
CGATGGGTCA TGGTCGTGGG CTTCGGGGTG GGGATCCCGC TGGACCTGGC GTTCTTCCTC
TCCCAGGAGA CGTACGGCTT CGGCCGGTTC CTGGCCGCGC CGTTCACCGC GTTCGGGATC
CTCGCGCTCA TGGCCGCGTT CTACCAGCGG CACCCGATCG GCGTGGCCGG GCGACACCTG
TCTCTCGTCG GACGGATGGC TCTGAGCTGC TACGTGCTCC AGAACATCCT CGGCCGCGTG
GCCCAGCGCT GGCTCGGCGG CTCCTCTCTC TCGCCGATGC TCGACCCCTT GATCGGCACG
GTCCTCATGT TCCTCGTGAT CGGCGCCCTG GTGATCCTCT TCGCGAAGGT CTGGCTGCGG
TACTACTCCC GGGGGCCGCT CGAGTACGTC TGGGACCTCA GCTTCCGGTT CCTCACCCGC
CGTCGATCCC GCTGA
 
Protein sequence
MTTPLAPPLP QPADASKKPR IASLDVIRGL AILGTLASNI WLFQAFFGER VIDVRWAELL 
SWTSEGKFLG LLTIMFGIGL EIQRQAAARR GLRWPGTYLV RAGLLFLDGV LNYIFVVQFD
VLRVYAVLGF VVAFVLLMPE KRQWIFIGVA LTTHVTLILL PWALPGFYGA PGFVFPGEFL
VAEGRPPYAY EIHNNALTVL SDLTVGSDTG SIFTLGLVCF TLGALVYRHG ILEARGSRLR
RWVMVVGFGV GIPLDLAFFL SQETYGFGRF LAAPFTAFGI LALMAAFYQR HPIGVAGRHL
SLVGRMALSC YVLQNILGRV AQRWLGGSSL SPMLDPLIGT VLMFLVIGAL VILFAKVWLR
YYSRGPLEYV WDLSFRFLTR RRSR