| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_14490 |
|---|
| Symbol | |
|---|
| ID | 8633085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 1627707 |
|---|
| End bp | 1629353 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | ABC-type multidrug transport system, ATPase and permease component |
|---|
| Protein accession | YP_003314219 |
|---|
| Protein GI | 269794764 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGA GAGAAATCCT TCACGAACAC CGAGCCAGGT TCGCATGGGC CTCCCTGCTG
ATCATCATCG GAACCGGCTT TGGGCTGATG CAGCCACTTG TCGCAGGACA GGTGGTGTCG
ACGGTGCAGC TGAGAGAGAG CGCTTGGCCA GCGATATGGA CTCTCGTCGG AATCTTTGTC
GTCCAGGTCG TCACCGAAAC CCTCGGTAGA TACCATCTTG AGGTAACGGG AGAAGAAACC
GCACGCTCCC TGAGAAGACG CGTCGTGGTT CGAGCCCTTC ATGCCCGACT TGAAACACTA
TCCGCCTATC GCTCGGGAGA TCTGATCTCG AGGATCGTCG GAGATCCTAG TGCATTCCAG
GGCGCTGTGA CCCACGGATA TCTTGACATG GCGATCGGAA TTCTTACCCT TGTGGGGGCA
GCGCTTCTTA TGGCGGCAAT CAGCCCGCTC CTGCTCATCA CGGTAGTGGC AATCATTGCC
ATTGCAGCGT TGGGTGCAGG AATATTTCTA TCCCAGCTGC AGGCGGTCGC CACCAAGAAG
CAAGCAGGGA TCGCATCCCT CACCGCTGAT CTTGAGAGCG TCCTCATCGC CGTCCGAACC
GTGAAGACGT CAAATGCCGA GCTACGCGAG TCCGAACGCT TGTCGCGTTC GGTCCAGCGG
GTCCTCGATG CCGCCCGACG AGGAGCCGGC CTGACAGCAG CAGCGACCCC TAGCATCTAT
CTCGCCGCAA CCGGCTCCCT CATAGCCGTC GTGGTGATCG GCGGCTCTCA AGTGGCAGAC
GGGAGTCTAA GTACGTCGGA GCTGGTGTCG GCGCTTCTGT ACTCCACCTA CATCGTGGTC
CCTCTGGGTG GCATCGTCGA GGGCTACACC TCGGTCGCTG CCGGCCGAGC TTCTCTACGA
AGAATCTCTG AGATCGTGAG CCTCGAGGCC GAGTACGAGT ACGGCGAACC TTCCACGATG
CAGGGCCCTG CCGACGAGAG GACAGACCAC CCGGTCGTCT TCGATCGTGT CGACTTCTCG
TACGCCGCCA CGGCACCGCC AGTTCTCAGG TCAGCGTCAA TCAAGGTGCA GCGCGGCTCT
CGGTGCCTCA TCGTGGGCAG CTCGGGTTCT GGCAAGTCGA CGGTACTCAA TCTCATGTGC
GGACTGTACG TCCCACAGGC TGGCTCGATC TCAACCCTGG GGTCCACACC TTCTGGTCAA
GACCTGCGAC AGCTGCGATC CAAGATCGCA CTGGTCGAGC AGAACTCTCC CGTCCTGCAC
GGGACTGCAC GGGAGGCCGT TTCGTATGCA GTTCCGCAGA TTTCTGATGC GGAGATACTG
CGCATCCTGT CCAGCGTCGG ACTGGACGGC GTCTTTCCCG ACTCATGTTC CCTGAACCGG
GACCTGGGCG ACCTCGGAGC GACTCTCTCG GGAGGCGAGA GGCAACGAAT CGCTCTGGCC
CGAGGGCTCG CTGTCCGACC AGACCTTCTG CTGCTGGACG AGCCGACCTC TAGTCTCGAT
ACCCGCTCAT TCGAGAGCGT CATGGCAAGC ATCGCCGCGC TTCCGAGAGA CGTCACTGTC
GTCATGGTCT CTCATGACTA CCGCCAGCTC GAGTGGGCTG ACTCGATCAT CGAGATCCGG
GATGGAGGGC TCGTATGGAA GACATGA
|
|---|
| Protein sequence | MTMREILHEH RARFAWASLL IIIGTGFGLM QPLVAGQVVS TVQLRESAWP AIWTLVGIFV
VQVVTETLGR YHLEVTGEET ARSLRRRVVV RALHARLETL SAYRSGDLIS RIVGDPSAFQ
GAVTHGYLDM AIGILTLVGA ALLMAAISPL LLITVVAIIA IAALGAGIFL SQLQAVATKK
QAGIASLTAD LESVLIAVRT VKTSNAELRE SERLSRSVQR VLDAARRGAG LTAAATPSIY
LAATGSLIAV VVIGGSQVAD GSLSTSELVS ALLYSTYIVV PLGGIVEGYT SVAAGRASLR
RISEIVSLEA EYEYGEPSTM QGPADERTDH PVVFDRVDFS YAATAPPVLR SASIKVQRGS
RCLIVGSSGS GKSTVLNLMC GLYVPQAGSI STLGSTPSGQ DLRQLRSKIA LVEQNSPVLH
GTAREAVSYA VPQISDAEIL RILSSVGLDG VFPDSCSLNR DLGDLGATLS GGERQRIALA
RGLAVRPDLL LLDEPTSSLD TRSFESVMAS IAALPRDVTV VMVSHDYRQL EWADSIIEIR
DGGLVWKT
|
|---|
| |