Gene Sked_14400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_14400 
Symbol 
ID8633076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1619394 
End bp1620566 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content72% 
IMG OID 
ProductZn-dependent oxidoreductase, NADPH:quinone reductase 
Protein accessionYP_003314210 
Protein GI269794755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCA ACTCCGCCGC GTGGATCGAG GCTCCCTTCG CCGACCTGGT CGTGCGACCG 
TCGCCGGTAC CCACCCCAGG CCCGCACCAG GTTGTGGTGG AGGTGCGCGC CGTCGCCGTC
AACCCGCTCG ACGCGATCGT CCAGTCCAAC GGCCGCCTCA TGTACCGGTG GCTCGACTAC
CCGGTGGTGC TCGGCGAGGA CGTCGCCGGG ACGGTGGTCG CCGTGGGGCC CGGTGCGAGC
AGGTTCACGG TCGGAGACCG GGTCGTGGCC TACGCGACGG GGCTCGAGAA GGGGCGGGAC
CACGTCTCCG GGGGAGGGTT CCAGCATCTC GTCGCGGTTG ACGAGGCACT AGCCGCCCCT
GTCCCCGACC AGGTGTCGTT CGACGACGTC GTCGTGCTGC CGCTGGCGCT GTCGACGGCG
GCCGCAGCGC TCTTCGAGAC GTCCCAGCTG GGTCTCGACC TCAGCAGGCT CGATCCCGGG
GCGGGCGACG GGTTCGGGCG AGACGACGAG GTCGTCGTCG TGTGGGGCGG GTCGACGAGC
GTGGGGAGCA ACGCGATCCA GCTCGCCCGT GCCGCGGGCT ACAGCGTCAT CACCACAGCC
TCCCCGCGTC ACCACGAGGA CATGCGGAGG CTGGGGGCGC GAGCAGTCTT CGACTATCGC
GACGACGACG TCGTCGCGTC GGTCGTCGCC GCTGCTCGGG GTGCGCGGGT CGTCGGGATC
GTGGCCGTCG CGGTCGGATC CGCTGAGCCG TGCGTGTCGA TCGCTGCGCA GACCGGCGCC
CGGCGGGTCG CGCTGACCAG CCCGTCGGTC TCCTTCTACG ACCAGCCGCG CCGCGGCGGG
CTCGCGTGGT CGAGGGTGCG GATGATGACC CGCCTCGTCT GGTCCAACGT CGCGCTGCAG
GCCCGTTGCC TGCGGCACGG CGTACGGGCT CGGTTCGTGT GGGGGAGTGC CATCGCGTCG
AGCGCCGTCG GACCTGCTCT CTGGTCCGGT TATCTGCCAG CGGCGCTCGC CGAAGGGCGG
CACCATCTCG CGCCTCGGCC TGCCGTGGTC GGCGAGGGTC TGGAGGCTCT CCAAGGGGCG
ATCGACACGA TGCGAGCTGG CGTCTCCGCG CAGAAGCTCG TCGTGACGCT GCCGGGGGCA
GGCCGGCCGG GGGCCTCGCC CGAGCCCAGG TGA
 
Protein sequence
MISNSAAWIE APFADLVVRP SPVPTPGPHQ VVVEVRAVAV NPLDAIVQSN GRLMYRWLDY 
PVVLGEDVAG TVVAVGPGAS RFTVGDRVVA YATGLEKGRD HVSGGGFQHL VAVDEALAAP
VPDQVSFDDV VVLPLALSTA AAALFETSQL GLDLSRLDPG AGDGFGRDDE VVVVWGGSTS
VGSNAIQLAR AAGYSVITTA SPRHHEDMRR LGARAVFDYR DDDVVASVVA AARGARVVGI
VAVAVGSAEP CVSIAAQTGA RRVALTSPSV SFYDQPRRGG LAWSRVRMMT RLVWSNVALQ
ARCLRHGVRA RFVWGSAIAS SAVGPALWSG YLPAALAEGR HHLAPRPAVV GEGLEALQGA
IDTMRAGVSA QKLVVTLPGA GRPGASPEPR