Gene Sked_14280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_14280 
Symbol 
ID8633064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1606293 
End bp1607447 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_003314198 
Protein GI269794743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCA GCCTGCAGAC CGTCTCTGCC GTCCCGTCCG ACGACGGCAA GCCCGCGGTG 
GCACCTCAGC TGCCGCAGCG CACGCTCGTC TGGATGGCGT TCCGGCGCCA CCGCCTGGCC
TACGCGAGCC TGTTCGTCAT CGTCGCCGCG TACGTCCTCG CGATGTTCTC CGGGTTCTTC
GCGCCCTACA GCACCCAGCA CCTGGTGGCG GACCGCACCT ACGCCCCGCC CCAGGCCGTC
CACCTGTTCT CCGACGAGGG CTTCGGCCTC CACGCCTACG GGCAGAGCGC GACGCAGGAC
CCGGAGACCC TCGAGCTCAC CTGGTCGACC GACACCAGCG AGCGCGTCGA CCTGGGGTTC
TTCGTGCAGG GCGAGCCGTA CTCGCTGCTC GGCCTGACGG TCGACCGGCA CTTCTTCGGC
CCCATGGACC CGTCCGAGAC CGTGTTCCTG CTCGGCTCGG ACCGGGTGGG GCACGACATG
TTGAGCATGC TGCTGCACGG CGCCCGGACG TCGCTGACCA TCGGTCTGGT CGGCGTCGCG
ATCGCCTTCG TCATCGGCAT CGTGCTCGGC AGCGTGTCCG GGTACTACGG CGGGCGGACC
GACACGGTCA TCCAGCGCAT CATCGAGTTC TTCATGTCGA TGCCCACGCT CCCGCTGTGG
CTCGGCCTGG CGGCCGCGCT GCCGACGTCG TGGAGCGGGA CACAGCGGTA CTTCGCCATC
ACGCTCATCG TGGCCGTCAT CGGCTGGACC GACCTCGCTC GGGTGGTCCG GGGGCGCTTC
CTGTCGCTGC GCGACGAGCA GTACGTCGTG GCAGCACGTC TCGACGGAGC CTCGACCCCG
CGGCTCATCG GCCGCTACCT CGTGCCGTCC ATGACCAGCC ACCTCATCGC CTCGGTGACG
CTGTCGGTGC CCGGGATGAT CCTCGCCGAG ACCGCGCTGT CGTTCCTGGG GCTGGGGATC
CAGCCGCCCG ACGTCAGCTG GGGCGTGCTG CTCCAGGAGG CGCAGAACCT GCGCGCCCTC
ACCACCGCGC CGTGGCTCCT CCTCCCGGGT CTGGCCGTGA TCATCACGGT GCTGGCCATG
AACTTCATCG GCGACGGGCT CCGCGACGCC GCCGACCCGT ACCAGACCCA GTCCCTCGGA
GGAGCGCGCT CATGA
 
Protein sequence
MATSLQTVSA VPSDDGKPAV APQLPQRTLV WMAFRRHRLA YASLFVIVAA YVLAMFSGFF 
APYSTQHLVA DRTYAPPQAV HLFSDEGFGL HAYGQSATQD PETLELTWST DTSERVDLGF
FVQGEPYSLL GLTVDRHFFG PMDPSETVFL LGSDRVGHDM LSMLLHGART SLTIGLVGVA
IAFVIGIVLG SVSGYYGGRT DTVIQRIIEF FMSMPTLPLW LGLAAALPTS WSGTQRYFAI
TLIVAVIGWT DLARVVRGRF LSLRDEQYVV AARLDGASTP RLIGRYLVPS MTSHLIASVT
LSVPGMILAE TALSFLGLGI QPPDVSWGVL LQEAQNLRAL TTAPWLLLPG LAVIITVLAM
NFIGDGLRDA ADPYQTQSLG GARS