Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_14270 |
Symbol | |
ID | 8633063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 1604563 |
End bp | 1606296 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | ATPase component of various ABC-type transport systems with duplicated ATPase domain |
Protein accession | YP_003314197 |
Protein GI | 269794742 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTCA CCACGCCCGT CACCGGCTCG GCCGCCGACG CCACCGAGGA CCTCATCCTG TCCGTGCGCG GCCTGCGCAC CACCTTCGCC GGGCTGCACG GCCCGGTCCA CGCCGTCCAG GACGTCGACC TCGACCTGCG CCGGGGCACG ACCCTCGCGG TCGTCGGCGA GTCCGGGTCC GGCAAGTCCG TGACGGTGCG CTCCCTGCTG GGGATCCTCG ACCCCGGCGG GCGCGTCGAG GCCGGCACCG CCCTGTTCCG CGCCGGCGCC GGCGACGCAC CCGTCGACCT CCTGCAGCTC GGGCCCAAGA GCACCGCGCT GCGCGAGGTG CGCGGCAAGC AGGTGGGCAT GATCTTCCAG GAGCCCATGG CGTCCCTCTC CCCCATGCAG ACCATCGGCG CGCACATCGT CGAGGTCCTG CGCATCCACC TGGGCATGAC CAAGGCCGAG GCCCGCGAGC GCGGCATCTC CCTGCTGCGG CGGGTGGGCA TCGCGGACCC GGCGCGCTGC ATGGACAGCT ACTCGTTCCA GCTGTCGGGC GGCATGTGCC AGCGTGCGAT GATCGCGCTG GCGCTGGCGT GCGACCCGCG GCTGCTCATC GCCGACGAGC CGACCACGGC GCTCGACGTC ACGACCCAGG CGAAGGTCCT CGACCTGCTG GAGGAGACGA CGGCGGAGTC GAACCTGTCG GTCCTGTTCA TCACGCACGA CCTCGGTGTG GTCGCGCGGG TGGCCGACCA CGTGGCGGTG ATGCGGTACG GGGCGCTCGT GGAGAGCGGG CCGGCGGCGC AGGTCTTCGA GGACCCGCAG CACGAGTACA CCCAGCAGCT GGTGCGCGCG TCGACGGTGA AGCCCCGGCA CGCGCGAGCA CAGCCGCGGG CCGAGAGCGG CGCGAGCGCT CCGGCGGACC TGCTGCCGGT CGTGGAGGTC AGCGACCTGC ACGTGACCTT CGGCGGGAAG GCGCGGGCCT TCTCGCGCAG GGCCGAGCCG GTGCACGCCG TCGCGGGGGT GACCCTCGAG GTGCTGCCGG GCGAGACCCT CGGTCTGGTC GGTGAGTCGG GCTCGGGGAA GACGACGACA GGCCGGGCGG TCGTGGGTGC GCAGGTCACC ACGGGCGGCT CGGTCGTCTA CCGCGACGCC GACGGCGTCA CGCACGACCT CGTCGCGATG TCGAAGGAGG CACGGCGCGG GTTCCGGACC GACGTCCGCA TGGTGTTCCA GGACCCGTAC ACCTCGCTCA ACCCGCGGAT GCGGCTGCTC GAGATCCTCG CGGAGCCGTT GCGCATCAAC CACCTGGCGT CAGGCTCCGA GATGCAGGAC CGCGTGGCGG CAGCCCTGGA GCGGGTGGGG CTCGAGGCGG ACCACATGAA CCGGTACCCG CACGCGTTCT CGGGCGGGCA GCGTCAGCGG GTCAACATCG CGCGGGCGCT CATCACCGAG CCGCGCCTCG TGGTCGCCGA CGAGGCGGTG TCGGCCCTCG ACGTGTCGGT CCGGGCGCAG ATCCTCGAGC TGCTCAACGG GCTGCAGGAC GACTTCGGCC TCGCGTACCT GTTCATCTCG CACGACCTGT CGGTCGTGGA GTCCGTGTGC GACCGCGTGG CGGTGATGCA GCACGGGATG ATCGTGGAGT CCCGCCCCAC GGCGGACCTG TTCGCCGAGC CGCAGCACGA GTACACGCGG ATGCTGCTGG ACTCGGTGCC GGTGCCCGAC CCGAGCGCGT ACGCGCGCCG ATGA
|
Protein sequence | MTVTTPVTGS AADATEDLIL SVRGLRTTFA GLHGPVHAVQ DVDLDLRRGT TLAVVGESGS GKSVTVRSLL GILDPGGRVE AGTALFRAGA GDAPVDLLQL GPKSTALREV RGKQVGMIFQ EPMASLSPMQ TIGAHIVEVL RIHLGMTKAE ARERGISLLR RVGIADPARC MDSYSFQLSG GMCQRAMIAL ALACDPRLLI ADEPTTALDV TTQAKVLDLL EETTAESNLS VLFITHDLGV VARVADHVAV MRYGALVESG PAAQVFEDPQ HEYTQQLVRA STVKPRHARA QPRAESGASA PADLLPVVEV SDLHVTFGGK ARAFSRRAEP VHAVAGVTLE VLPGETLGLV GESGSGKTTT GRAVVGAQVT TGGSVVYRDA DGVTHDLVAM SKEARRGFRT DVRMVFQDPY TSLNPRMRLL EILAEPLRIN HLASGSEMQD RVAAALERVG LEADHMNRYP HAFSGGQRQR VNIARALITE PRLVVADEAV SALDVSVRAQ ILELLNGLQD DFGLAYLFIS HDLSVVESVC DRVAVMQHGM IVESRPTADL FAEPQHEYTR MLLDSVPVPD PSAYARR
|
| |