Gene Sked_13970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13970 
Symbol 
ID8633033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1573550 
End bp1575985 
Gene Length2436 bp 
Protein Length811 aa 
Translation table11 
GC content74% 
IMG OID 
ProductFO synthase subunit 1 /FO synthase subunit 2 
Protein accessionYP_003314171 
Protein GI269794716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.256326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGCG ATGCGATCGA CGCGGCCCTG ACCCGGGCCG AGCAGTCCGG GACGACCACC 
CAGGACGACG CGACGCTCCT CCTCGCAGCG CGCGGCGACG AGCTCGAGCG GCTGCTGGTG
CTCGCCTCCC GGATCCGTGA CGAGGGGCTC GAGCGTGCCG GCCGCGCCGG CGTCATCACC
TACTCCAAGA AGGTGTTCGT CCCGCTCACC AAGCTGTGCC GGGACCGTTG CCACTACTGC
GTGTTCGTCG AGACCCCGGG GAGCCTGCGC GCGTCGGGCG AGCAGTCGTT CATGGAGCCC
GAGGACATCC TCGCGGTCGC CCGGGCCGGC GCCGCGCTCG GCTGCAAGGA GGCGCTGTTC
ACCCTGGGCG ACCGGCCCGA GGACCGGTGG CCGTCCGCTC GGGCGTGGCT CGACGAGCAC
GGGTACTCCT CGACCCTCGA GTACGTGCGG GCGATGGCCG TGCTGGTCCT CGAGGAGACC
GGGCTGCTCC CCCACCTCAA CCCGGGCGTG ATGTCGTGGG CCGAGCTCCA GCGCCTGCGG
CCGGTCGCCC CGTCGATGGG CATGATGCTC GAGACGACCG CGACCCGCCT GTGGTCCGAG
AAGGGCGGGG TGCACTACGG GTCCCCGGAC AAGGACCCGG CGCTGCGCCT GCGCGTCCTC
GAGGACGCCG GCCGCTCGAA GGTCCCCTTC ACCACGGGTG TGCTGCTGGG CATCGGCGAG
GACGACGCCG AGCGCGCCGA GGCGCTCTTC GCCATCCGCG CCTCGCACGA GCGCCACGGG
CACGTCCAGG AGACCATCGT CCAGAACTTC CGCGCGAAGC CGCGGACCGC GATGCAGAAC
GACTCCGACC TCGAGCTCCA GGAGTACATC GCCGCGGTGG CCGTCGCCCG TGTGGTCATG
GGACCCGACG CGACCGTCCA GGCACCGCCG AACCTCACCG ACCCGCACGA GCTCGGCCTG
CTGGTCCGCG CCGGGATCGA CGACTGGGGC GGCGTCAGCC CGCTCACCGC GGACCACGTG
AACCCCGAGC GTCCCTGGCC GCACATCGGC GACCTCGCAG CGTTGACTGC GACCGCCGGA
TTCGAGCTGC GCGAGCGTCT CACCGCCCAC CCGCCGTACC TCGCGGACGC CGGGACCTGG
GTCGACGACC GCATCCGCCC GCACCTCGAC GCGCTCACCG ACACGGAGAC CTTCCTGGCC
GTCGAGGACG CCGAGGTCGT CGGCAGGCCC TTCGAGCCCG TGCTCGTCTC TCGGGCGACC
CCCCGGAGCC CCGACGCCCC GGCGGGCACC GGAGCCAGCC CTCGCCTCAG CCGCGAGGTC
GCCGACGTGC TGTCCCGTGC CACGGACGCC CCGGCCGGGC TCTCCGACGC GGACTACCTC
GTCCTGCTCT CCGCCGACGG CGCCGACCTC GACGCCCTCG CTGCCCTCGC CGACGCGGTG
CGACGCGAGT CCGTCGGCGA CGACGTGACC TTCGTGGCCA ACCGCAACCT CGACGCCTCG
CTGTTCTCGC CGAGCCGCCT CACGGTCGGT CGCGTCACGG AGCTGGTCGC CGAGGCGCAG
GCCCTCGGGG CCACCGAGAT CTGCGCACAG GGCGCCGTGA GCGGCGAGCC GGGCTACGAC
TACCTCGACC TCGTGCGGGC TATCCGCACG CAGGCCCCGG AGATGCACCT GCACGCCTTC
CGGCCGGCCG AGCTGTACGC GGGCGCGGCC CGCCAGGGGC TGACCCTCGA CGAGTACGTC
GCAGTGCTGC GCTCGGCCGG GGTGGACACG GTGCCCGGGA CCGGGGCCTT CGTCCTCGAC
CAGGACGTCC GCGAGGTCCT GGGCGGTCCG TCGGTGCTGA CGGTCGACGC GTGGGAGCGC
GCGATCCTCA CCGCGCACCG CGCCGGCCTG CGCTCTACCG CGACGCTCGT CTACGGCTCC
GTCGAGACGC CGGAGCAGCA GCTGGCGCAC CTGCGCCGCC TCGCGGCGAT CCAGGACTCG
ACCGGTGGCT TCACCGAGAT GATCGCCATG CCCTTCGTGC CGCACGACGC GCCGACCGTC
ACCGGGACGC GCGGCGGACC CTCGCTGCGC GAGACCCGTG CGGTCCACGC GGTCGCCCGC
CTCGTGCTCA CCGGTCGGAT CGACAACCTG CAGACGGCGT GGACCAAGCA CGGGATGCGC
ACCAGCCAGA CGCTGCTGCT GGGCGGGGCG AACGACCTCG GTGGGCTGCT GCTCGACGGT
GCCCTCGACC CCGAGGTCGG GGCGGAGGCG TACCGTGCCC TGGACCGGGC CGACGTCGTG
CGCCTCGCCG ACGAGATCGG GCGCCCGGTG CGTCAGCGCA CCACCGACTA CGGGGCCGCC
GACACGTCGG ACCTCCTCAC CGGCGGTGGG GACGGTCACC CCACTGTCGA GCCCTGGCTG
CGCACCGACC TCATCAGCGG CGCGCGCCTG CGATGA
 
Protein sequence
MTCDAIDAAL TRAEQSGTTT QDDATLLLAA RGDELERLLV LASRIRDEGL ERAGRAGVIT 
YSKKVFVPLT KLCRDRCHYC VFVETPGSLR ASGEQSFMEP EDILAVARAG AALGCKEALF
TLGDRPEDRW PSARAWLDEH GYSSTLEYVR AMAVLVLEET GLLPHLNPGV MSWAELQRLR
PVAPSMGMML ETTATRLWSE KGGVHYGSPD KDPALRLRVL EDAGRSKVPF TTGVLLGIGE
DDAERAEALF AIRASHERHG HVQETIVQNF RAKPRTAMQN DSDLELQEYI AAVAVARVVM
GPDATVQAPP NLTDPHELGL LVRAGIDDWG GVSPLTADHV NPERPWPHIG DLAALTATAG
FELRERLTAH PPYLADAGTW VDDRIRPHLD ALTDTETFLA VEDAEVVGRP FEPVLVSRAT
PRSPDAPAGT GASPRLSREV ADVLSRATDA PAGLSDADYL VLLSADGADL DALAALADAV
RRESVGDDVT FVANRNLDAS LFSPSRLTVG RVTELVAEAQ ALGATEICAQ GAVSGEPGYD
YLDLVRAIRT QAPEMHLHAF RPAELYAGAA RQGLTLDEYV AVLRSAGVDT VPGTGAFVLD
QDVREVLGGP SVLTVDAWER AILTAHRAGL RSTATLVYGS VETPEQQLAH LRRLAAIQDS
TGGFTEMIAM PFVPHDAPTV TGTRGGPSLR ETRAVHAVAR LVLTGRIDNL QTAWTKHGMR
TSQTLLLGGA NDLGGLLLDG ALDPEVGAEA YRALDRADVV RLADEIGRPV RQRTTDYGAA
DTSDLLTGGG DGHPTVEPWL RTDLISGARL R