Gene Sked_13790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13790 
Symbol 
ID8633015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1551936 
End bp1554125 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content68% 
IMG OID 
Productglutamine synthetase 
Protein accessionYP_003314153 
Protein GI269794698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.909317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGCG GGATCATGAC TGCCAACCAC GTCCGAAGCC AGGCGATCAC CGAGGTGCTC 
ACCCGCCCCG CCGTGCAGAC GGCTGAGACC CGTCCGCTGA GCGAGACGTG GGCGACCGAC
GTCTTCAACC TCACGAAGAT GGAGGAGGCG CTCTCCAAGA CCGCCTTCAA GGCGGTCAAG
AAGACCGTCA CGACCGGAGA GCCGCTCGAC CCGGCCACGG CCGACATCGT CGCCGCCGCG
ATGAAGACCT GGGCGATGAG CAAGGGTGCG AAGTTCTTCT CGCACGTGTT CTACCCGCTC
ACCAACATCA CGGCCGAGAA GCACGACGGG TTCATCGTCA CCAACTCGGA CGGTCAGGCG
ATCACCGAGT TCACCGGCAG CCTGCTCATC AAGGGCGAGC CCGACGGCTC CTCGTTCCCC
AACGGCTCGC TGCGCATGAC GAACGCCGCC CGCGGGTACA CCGCCTGGGA CCCCACCAGC
CCCGCGTACA TCATGTGGAC CGCCAACGGC GCGACGCTCA TGATCCCGTC GGTCTTCATG
TCGTGGACCG GCGAGTCCCT CGACAAGAAG ATCCCGCTGC TGCGCTCGAT CTCCGCCATG
GACGTCTCCG CGCGCCGCGT CCTCACCCTC ATGGGCGAGA CGGACATCGC CCCGCTCAAC
GCCAGCTGTG GCCCCGAGCA GGAGTACTTC CTCGTCGACC AGCACTTCGC GGCCGCTCGC
CCGGACCTGC TGCTCTCCGG CCGGACGCTC TTCGGCGCCC CGCCCGCCAA GGGCCAGGAG
TTCGACGACC ACTACTTCGG GGCGATCCCC GAGCGCGTGC AGGTCTTCAT GCAGGCCTTC
GAGGAGAAGC TCTACCGCCT GGGCATCCCC GCCAAGACCC ACCACAACGA GGTGGCCCCC
GGCCAGTTCG AGATCGCGCC GTACCACGAG GCCGCGAACG TCGCCGCGGA CCACCAGCAG
CTGCTCATGA CCGTGATGAA GGCGACCGCT GCGGAGCACG GGTTCCTGTG CCTGCTGCAC
GAGAAGCCCT TCGCCGGCCT CAACGGCTCG GGCAAGCACG TCAACTGGTC GGTGGGCAAC
GCCACCCAGG GCAACCTGCT CGACCCGGGG ACCTCGCCCG AGCACAACCT CAACTTCCTG
CTCTTCTGCG GTGCGGTCAT CCGCGGCGTG CACAAGTACG GCCCGCTGCT GCGCGCCGTC
ATCGCGTCGG CGTCCAACGA CCACCGTCTC GGTGCGAACG AGGCCCCGCC GGCGATCCTG
TCGGTGTACC TCGGCGACCA GCTCGAGGGC GTCTACAACG ACATCAAGGC CGGGAAGATC
TCGGTCTCCT CCGACGGTGG CGTGATGGAC CTCGGCCTGT CGCAGATCCT CAACTTCCAG
CGCGACCCGG GCGACCGCAA CCGCACCTCC CCGTTCGCCT TCACCGGCAA CCGGTTCGAG
TTCCGCGCGG TCGGCTCCTC GCAGTCGATC TCCGGTCCCC TCACGGCGCT CAACACGATG
CTGGCCGACT CCCTCACCTG GGTCGCCGAC CAGCTCGAGA CGCAGCTCGA GAAGGGCCTG
ACGCGCCCCG AGGCCGTCGC GGTCGTCGTC AAGGAGCTCA TGGAGCTGCA CGGCGACGCC
GTCTTCGGCG GCGACGGCTA CTCCTCCGAG TGGCACGAGG CTGCTGTGGC GGAGCGCGGT
CTGCGCAACC TGCCGACCAG CGCCGAGGCT CTCCCTGTCT ACACCGAGCC GGACGTCATT
GACCTGTTCG AGCGGACGGG CGTGCTGTCG GCCGTCGAGC TCAACGCCCG GTACGAGGTG
TACTCCGAGC AGTACATCAA CTCGATCGCG GTCGAGGCCC GTCTGGTCGT CGACATGGCG
CGGACCGTCA TCTACCCGGC CGCCCTCAAG TACGCCGCTG ACCTCGCCAC CACGTACGCC
GCGGCCAACG AGGTCGGGAT CTCCTTCGAC ACGGCCCAGG TCAAGATCAT CGCCGAGAAC
GCGAACCTGC TGCTGTCGAC CGCGACCCAG CTGGAGTCCG CGCTGGAGTC GCACGACTTC
GCCGACACCA AGGCGCACAT GGAGCACTCG GCGACCTCGA TCAGGGGCCT CATGGAGACC
GCTCGCGGCT ACGCGGACGC CCTCGAGGCC CAGGTCGACG ACGCCGTCTG GCCGCTGCCG
AAGTACCGCG AGATGCTCTT CATCAAGTAG
 
Protein sequence
MESGIMTANH VRSQAITEVL TRPAVQTAET RPLSETWATD VFNLTKMEEA LSKTAFKAVK 
KTVTTGEPLD PATADIVAAA MKTWAMSKGA KFFSHVFYPL TNITAEKHDG FIVTNSDGQA
ITEFTGSLLI KGEPDGSSFP NGSLRMTNAA RGYTAWDPTS PAYIMWTANG ATLMIPSVFM
SWTGESLDKK IPLLRSISAM DVSARRVLTL MGETDIAPLN ASCGPEQEYF LVDQHFAAAR
PDLLLSGRTL FGAPPAKGQE FDDHYFGAIP ERVQVFMQAF EEKLYRLGIP AKTHHNEVAP
GQFEIAPYHE AANVAADHQQ LLMTVMKATA AEHGFLCLLH EKPFAGLNGS GKHVNWSVGN
ATQGNLLDPG TSPEHNLNFL LFCGAVIRGV HKYGPLLRAV IASASNDHRL GANEAPPAIL
SVYLGDQLEG VYNDIKAGKI SVSSDGGVMD LGLSQILNFQ RDPGDRNRTS PFAFTGNRFE
FRAVGSSQSI SGPLTALNTM LADSLTWVAD QLETQLEKGL TRPEAVAVVV KELMELHGDA
VFGGDGYSSE WHEAAVAERG LRNLPTSAEA LPVYTEPDVI DLFERTGVLS AVELNARYEV
YSEQYINSIA VEARLVVDMA RTVIYPAALK YAADLATTYA AANEVGISFD TAQVKIIAEN
ANLLLSTATQ LESALESHDF ADTKAHMEHS ATSIRGLMET ARGYADALEA QVDDAVWPLP
KYREMLFIK