| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_13740 |
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| Symbol | |
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| ID | 8633010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 1547356 |
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| End bp | 1548861 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003314148 |
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| Protein GI | 269794693 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.138936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTATCGC CCACGAGCCC TCGGCAGCGA TGGCTGCTCC TCGTGACCGT GAGCGCAGGA
CTGCTGCTCA TCACCCTCGA CAACTCGATC CTCTACACCG CGCTGCCCAC CCTCACCGAG
GAGATCGGCG CGTCGCCGTC GCAGGGCCTG TGGATCATCA ACGCCTACCC CCTCGTCATG
GCAGGCCTGC TGCTCGGAGC AGGGACCCTC GGCGACCGTG TCGGGCACCA GCGCATGTTC
CTCGTCGGGC TGGTCATCTT CGCGGCGGCC TCCCTGGTCG CGGCATTCGC ACCCGCCCCC
GAGGTCCTCA TCGCCGCACG CGCCGTGCTG GCGGTCGGTG CGGCGTCGAT GATGCCGGCC
ACGCTCGCGC TGATCCGCAT CGCGTTCACG ATCGAGCGCG AGCGCAACGT CGCCATCGCC
GTATGGGGAT CCGTCGCGCT GATCGGCAGC GCCCTGGGAC CGATCGTCGG AGGAGCCCTC
CTCGAGCACT TCTGGTGGGG CTCGGTGTTC CTCGTCAACG TCCCCGTCGC GGTCATCGCG
TTGCTCGTCG TGCTCAAGGT CGCCCCGCAC AACGACCCCG ACCCCTCGAA GACGTGGGAC
CTGCTGTCTT CCGTCCAGGT GATGGTCGCG ATGGTCGGGC TCGTCTTCGC CCTCAAGGAG
GTCACCAAGC CCGGTCCGTC GTGGCCCGTG GTCGCGGCAG CCCTCGTGGC CGCAGCACTC
GGAGCGATCA CCTTCACCCG TCGCCAGTCA CGCCTGGACC ACCCCCTGCT CGACTTCTCG
ATCTTCCGGA ACCGCGCCTT CGCCGCCGGT GTCCTCGCGG CAGCGTTTGC GATGTTCGCC
GTGGGCGGCA TCCAGCTCGT CACCAGCCAG CGCTACCAGC TGGTCGAAGG CCTCAGCCCG
CTCGAGGCCG GCGCGCTGGT CGCGGCCGTG GCGGTCGGCG CCCTGCCCAC CGGGCTGCTC
GGCGGTGCGT TCTTGCACGT GGTCGGGCTC AGGACCCTCA TCGGCGGCGG GCTGACCGTC
AGCACCGTCG GGGTGGTCGT GACCGTCACC AGCTTCCAGT CGGGCCTGGG CTGGATGATC
GCCGGTCTCG CGCTGACCGG CATGGGGCTC GGCGCGGCGA TGTCCGTCGC CTCGACCGCG
ATCGTCGGCA ACGTGCCGCC GCGCCGCGCC GGCATGGCCT CGTCGCTCGA AGAGGTCTCC
TACGAGTTCG GCAGCCTCAC CGCGGTCGCG ATCCTCGGTT CGCTGCTCAC CGCGATCTAC
ACCAGCACCA TCACCCTGCC GCCCGGAGCG CTGGCCGAGG CCGGAGACTC CCTCTCCGGG
GCGCTGTCCA CGAGCGCCTC GGACCCTGGC ATCCTAGAGG CGGCCTTCAC GGCGTTCGAC
CACGGGTACT CCGTCGTCAT GGTCGTCGTG GCGGCAGTCC TGGCGACCGG GGCGGCCCTG
ACCACCGCGC TGCTCTGGCG CTACGGTCCG GGGAGCGCCT CCTCGTCCTA CGACTCCGAC
CACTGA
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| Protein sequence | MVSPTSPRQR WLLLVTVSAG LLLITLDNSI LYTALPTLTE EIGASPSQGL WIINAYPLVM
AGLLLGAGTL GDRVGHQRMF LVGLVIFAAA SLVAAFAPAP EVLIAARAVL AVGAASMMPA
TLALIRIAFT IERERNVAIA VWGSVALIGS ALGPIVGGAL LEHFWWGSVF LVNVPVAVIA
LLVVLKVAPH NDPDPSKTWD LLSSVQVMVA MVGLVFALKE VTKPGPSWPV VAAALVAAAL
GAITFTRRQS RLDHPLLDFS IFRNRAFAAG VLAAAFAMFA VGGIQLVTSQ RYQLVEGLSP
LEAGALVAAV AVGALPTGLL GGAFLHVVGL RTLIGGGLTV STVGVVVTVT SFQSGLGWMI
AGLALTGMGL GAAMSVASTA IVGNVPPRRA GMASSLEEVS YEFGSLTAVA ILGSLLTAIY
TSTITLPPGA LAEAGDSLSG ALSTSASDPG ILEAAFTAFD HGYSVVMVVV AAVLATGAAL
TTALLWRYGP GSASSSYDSD H
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