Gene Sked_13710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13710 
Symbol 
ID8633007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1544667 
End bp1546055 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content68% 
IMG OID 
Productglycyl-tRNA synthetase 
Protein accessionYP_003314145 
Protein GI269794690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.797043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.202364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCAAG CGCCCTCTCG TCTCGACGCC GCCATCTCCC TCGCGAAGCG CCGTGGCTTC 
GTCTTCCAGT CCGGCGAGAT CTACGGAGGT TCGCGCTCGG CGTGGGACTA CGGGCCCCTC
GGTGTCGAGC TCAAGGAGAA CATCAAGCGC CAGTGGTGGC GCACCATGGT CACGAGCCGC
GACGACGTCG TGGGCCTCGA CTCCGCGGTC ATCCTGCCGC GCAAGATCTG GGAGGCCTCC
GGCCACGTCG GCGTCTTCAC CGACCCGCTG ACCGAGTGCC TCTCGTGCCA CAAGCGGTTC
CGCGAGGACC AGATGCTCGA GGAGTTCGAG GAGAAGAAGG GCCGCGTCCC CGAGAACGGC
CTCGCCGACA TCGCCTGCCC CAACTGCGGG ACCCGCGGCC AGTGGACCGA GCCCCGCGAC
TTCAACATGA TGCTCAAGAC GTACCTCGGC CCCGTCGAGG ACGAGTCCGG GCTGCACTAC
CTGCGCCCCG AGACCGCGCA GGGCATCTTC GTGAACTTCG CCAACGTCGT CGGCGCCAGC
CGCAAGAAGC CGCCGTTCGG CATCGGCCAG ATCGGCAAGT CCTTCCGCAA CGAGATCACG
CCGGGGAACT TCATCTTCCG CACGCGTGAG TTCGAGCAGA TGGAGATGGA GTTCTTCGTC
GAGCCCGGCA CGGACGCCGA GTGGCACCAG TACTGGATCG ACCTGCGCAC CGCCTGGTAC
GTGGACCTCG GCATCAGCCG TGACAACCTG CGCCTGTTCG AGCACCCGCA GGAGAAGCTG
TCGCACTACT CGACCCGCAC CGTCGACATC GAGTACCGCT TCGGGTTCAC CGGCTCCGAG
TGGGGCGAGC TCGAGGGCAT CGCGAACCGC ACGGACTTCG ACCTCAAGAC GCACTCGGAG
CACTCCGGCA AGGACCTCAG CTACTTCGAC CAGGGCAAGA ACGAGCGCTG GGTCCCGTAC
GTCATCGAGC CCGCGGCCGG TCTGACGCGC TCGCTCATGG CGTTCCTCGC CGAGGCGTAC
ACCGAGGACG AGGCCCCGAA CGCGAAGGGC GGCGTCGACA CCCGCACCGT GCTCAAGCTC
GACCCGCGCC TGTCGCCGGT CAAGGCCGCG GTCCTGCCGC TGTCCCGCAA CGAGCAGCTC
TCGCCCAAGG CGCGCGACCT CGCGACCGAG CTCCGCAAGC ACTGGAACGT CGACTTCGAC
GACGCCGGTG CGATCGGCCG CCGCTACCGC CGCCAGGACG AGATCGGCAC GCCGTTCTGC
ATCACCGTCG ACTTCGACAC CCTCGACGAC CAGGCCGTGA CGATCCGCCA CCGCGACGAC
ATGTCGCAGG AGCGCGTCGC CCTCGACCAG GTCACCGCGT ACCTCGGCGC CCGTCTCCTC
GGAGCCTGA
 
Protein sequence
MAQAPSRLDA AISLAKRRGF VFQSGEIYGG SRSAWDYGPL GVELKENIKR QWWRTMVTSR 
DDVVGLDSAV ILPRKIWEAS GHVGVFTDPL TECLSCHKRF REDQMLEEFE EKKGRVPENG
LADIACPNCG TRGQWTEPRD FNMMLKTYLG PVEDESGLHY LRPETAQGIF VNFANVVGAS
RKKPPFGIGQ IGKSFRNEIT PGNFIFRTRE FEQMEMEFFV EPGTDAEWHQ YWIDLRTAWY
VDLGISRDNL RLFEHPQEKL SHYSTRTVDI EYRFGFTGSE WGELEGIANR TDFDLKTHSE
HSGKDLSYFD QGKNERWVPY VIEPAAGLTR SLMAFLAEAY TEDEAPNAKG GVDTRTVLKL
DPRLSPVKAA VLPLSRNEQL SPKARDLATE LRKHWNVDFD DAGAIGRRYR RQDEIGTPFC
ITVDFDTLDD QAVTIRHRDD MSQERVALDQ VTAYLGARLL GA