Gene Sked_13660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13660 
Symbol 
ID8633002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1539512 
End bp1540444 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC-type Mn2+/Zn2+ transport system, permease component 
Protein accessionYP_003314140 
Protein GI269794685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.550676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCT TCTCCGAGAT CAGCGGCATG CTGTCCGACC CCTTCATGCA GCGGTCCCTC 
GCGGCCGCCG TGATCGTCGG GCTCACCGCC CCCGTCATGG GCACCTACCT CGTCCAGCGC
AAGCTCTCCC TGCTCGGCGA CGGCATCGGG CACATCGCGC TCACCGGAGT CGCGGTCGGG
TGGCTCGTCG GGTCGACCAT GGGCCTGGTC CAGAACGACG CCCTCGCCAT CCCCGGCGCC
GTGGTCGCCG CCGTCCTGGG CTCCGTGGCG ATCGAGCTGG TGCGCGAGCG TGGCCGGACG
AGCGGCGACG TCGCGCTCGC CCTGATGTTC TACGGCGGCA TCGCCGGCGG TGTGCTCATC
ATCGGGTTCG CCGGCGGCAC CAACGCCAAC CTCATGTCGT ACCTCTTCGG GTCCATCTCG
ACGGTCACCA TGACCGACCT CTACCTCACG GTCGGGCTCG GCGCGGTCAT CCTGCTGGTC
GGGGTGGGGC TGAGCTCGGC GCTGTTCAGC GTGTCCCACG ACGAGGACTT CGCGCGGGCC
TCCGGCCTGC CGGTCCGCGG CCTCAACATC GCGATCGCCG TCATCGCGGC GCTCACCGTG
ACCGTCTCCA TGCGCGTGGT GGGGCTGCTG CTCGTCAGCG CGCTGATGAT CATCCCCGTC
GCCGTCGCCC AGCTCGTCAC CACGTCGTTC CGACGCACCA TGGTCGTGGC CGTCGCGATC
GGCGTCGCCG TGTGCGTCGT CGGCCTCTCG ATCACCTACT GGCAGCCGCA GTCACCGGGC
GCGACCATCG TCGTCCTCGC GATCGCTCTC TACGCCGTGG TCGCCGCGCT GCGCCCGCTC
GTGGTGCGAC GGCGGACGGT CGCCCGCGAC CCGCACCCCG ATATGATGGA CGACGTCACA
CTCGACCAGG GAGCCCCCAG ATGCAGCGCA TGA
 
Protein sequence
MTFFSEISGM LSDPFMQRSL AAAVIVGLTA PVMGTYLVQR KLSLLGDGIG HIALTGVAVG 
WLVGSTMGLV QNDALAIPGA VVAAVLGSVA IELVRERGRT SGDVALALMF YGGIAGGVLI
IGFAGGTNAN LMSYLFGSIS TVTMTDLYLT VGLGAVILLV GVGLSSALFS VSHDEDFARA
SGLPVRGLNI AIAVIAALTV TVSMRVVGLL LVSALMIIPV AVAQLVTTSF RRTMVVAVAI
GVAVCVVGLS ITYWQPQSPG ATIVVLAIAL YAVVAALRPL VVRRRTVARD PHPDMMDDVT
LDQGAPRCSA