| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_13570 |
|---|
| Symbol | |
|---|
| ID | 8632993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 1529592 |
|---|
| End bp | 1531886 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | DNA/RNA helicase, superfamily I |
|---|
| Protein accession | YP_003314131 |
|---|
| Protein GI | 269794676 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.176836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCACA CCACCAGCGT CTTCGACCTG CCAGAGCACC TGGCGGCGAA GGCCGACCCC
GCGCTCGTCG AGCGCGACGA GCAGCTGTTC ACCGAGCTGA GCGGCTCGCT CGAGCAGACC
GTCACCGACC TCACCGCACG CCTCGCCACC GTGCGACGCT CCCCCGCGGG ACACGGCCAG
ACCGCCGTGG AGCGTGACGC GGAGATCCAC CGCCTCGTCG CCCGGCTGCG TGGTCTGCGC
CGGCACGGGC CGGACCTCTG CCTCGGACGG ACCGTCGCCG ACGACGCGAC CGCCGAGCAC
GTCTACGTCG GGCGGCAGGG CCTCACCGAC GCAGCGGGCG AGCCGCTGCT CGTCGACTGG
CGCTCCCCCG CCGCCGAGGC CTTCTTCGCC GCGACCCCGG CGCACCCGAT GGGCCTGGCC
AGCCGCCGCC GGTACCGCTG GCACCTCGGC CGGGTGCGCG ACTACTGGGA CGAGCCGCTC
ACCCCTGCCG CGCTCGCCAG CAACCGAGAG GACCACGGGG ACGACGACGG TGGCAGGGAG
GGCGACGGTG GTGTCGGCGA CGCGCTCCCC GACGCACGGT CGGCCTTCGT CGCGAGCCTC
GGCGGCAGCC GCACCGACCG CATGCGCGAC GTCCTGGGCA CCATCCAGGG CGACCAGGAC
GCGATCATCC GCGCCGGGTC GCGCGGGACG CTCGTGGTCG ACGGCGGTCC CGGGACCGGG
AAGACGGTGG TCGCGCTGCA CCGCTGCGCC TACCTGCTCT ACACCGACCC GCTCCTGGGC
CACCGCCGCG GCGGGGTCCT GTTCGTGGGC CCGCACCAGC CCTACCTCGA CTACGTCGCC
GACGTCCTGC CCGACCTCGG CGAGGACGGC GTGCAGACCT GCACGCTCGC CGACCTCGTC
CCCGAGGGGG CTGCGGCCGT CCCCGAGCGC GACCCCGCGG TCGCGCGGCT CAAGGGGAAC
CTGGCGATGG TCGAGGCCGT CGAGGCCGCG GTGCGCTTCT ACGAGCAGCC TCCCGCCGAC
GGGCTCCTCG TCGAGACGCC CTGGGCCGAC CTCTGGCTCA GCCCGGCCGA CTGGGCCCGG
GCCTTAGGGT CACCCGACCC CGGCACCCCC CACAACGAGG CGCGCGACGG TATCCGGGAC
GAGATCGTCT CGATCCTCGT GGACCGGCTC GCCGAGCAGG GCGACGACAG GTACGAGGAC
GGTGCGGAGG TGGAGGACGG TGCAGGGCTC GCGGACGACG GGGCGTACGG CGGCGACGAG
GGCGGCGACG TCTCGCCGGA CGTCCTCCGC GCGGCGGTGC GCCGCGACGC CGGTCTGACC
GCCGCGGTCG ACCGTGCGTG GCCCCTCCTC GACGCCGCGG AGCTCGTCGC CGACCTGTGG
GCGGTCCCCG CGTACCTGCG GCACTGCGCG CCGTGGACGA GCCCGGAGGA CCGCGCCGCG
CTCCGACGTC CGGCCGAGAG CGCCTGGACC GACGCCGACC TGCCGCTCCT CGACGCGGCC
CGTCACCGCC TCGGCGACCC TGATGCCTCC CGCCGACGCG CACGCCACGA GGCGACCGTC
TCGTCCGAGC TCGAGTACCG CTCGCAGGTG ATCGACGACC TCGTCGCCGC CGACGACGAC
CGCGAGAGCG AGGTGGTGAT GCTCCGCAGC AGCGACCTCG CCGAGGCCCT GGCCGGTGCC
TTCGACCCCG ACGACGTCGC GCACGACCAC CTCGTCGGTC CCTTCGCGCA CGTGGTGGTC
GACGAGGCGC AGGAGCTCAC CGATGCCGCG TGGCAGATGG TGCTGCGCCG CTGCCCCTCG
CGCAGCCTCA CCGTCGTCGG AGACCGTGCC CAGGCTCGCG GCGGGTTCAC GGAGACCTGG
CAGGAACGGC TCGACAGGGT GGGTCTCACC GGTGTCACGG TCTCGCCGCT CACCTACAAC
TACCGCACCC CCGCGGCGAT CATGGCGGAG GCGGAGGTCG TCGTCCGGGC GGCGATCCCG
GACGCGAACG TGCCGGTCTC GGTCCGCACC ACGTCGGGGC ACGAGGTCCG GCACGGGTCT
GTCGACGAGC TCGAGACCGT GCTCGAGGAG TGGCTGGCCG AGCACCCGGA CGGCACGGCC
TGCGTCGTCG GAGACCCAGG GTTCGTCGGG ACCTCGCGCG TGCGGTCCCT CGCACCCGAG
CTCACCAAGG GGCTCGAGTT CGACCTCGTC GTGCTCGTCG ACCCGGAGGC CCTCGGGTCC
GGGGTCGAGG GAGCGGTCGA CCGGTACGTC GCGATGACGC GGGCCACCGA GCGGCTCGTG
GTGCTCACGC ACTGA
|
|---|
| Protein sequence | MQHTTSVFDL PEHLAAKADP ALVERDEQLF TELSGSLEQT VTDLTARLAT VRRSPAGHGQ
TAVERDAEIH RLVARLRGLR RHGPDLCLGR TVADDATAEH VYVGRQGLTD AAGEPLLVDW
RSPAAEAFFA ATPAHPMGLA SRRRYRWHLG RVRDYWDEPL TPAALASNRE DHGDDDGGRE
GDGGVGDALP DARSAFVASL GGSRTDRMRD VLGTIQGDQD AIIRAGSRGT LVVDGGPGTG
KTVVALHRCA YLLYTDPLLG HRRGGVLFVG PHQPYLDYVA DVLPDLGEDG VQTCTLADLV
PEGAAAVPER DPAVARLKGN LAMVEAVEAA VRFYEQPPAD GLLVETPWAD LWLSPADWAR
ALGSPDPGTP HNEARDGIRD EIVSILVDRL AEQGDDRYED GAEVEDGAGL ADDGAYGGDE
GGDVSPDVLR AAVRRDAGLT AAVDRAWPLL DAAELVADLW AVPAYLRHCA PWTSPEDRAA
LRRPAESAWT DADLPLLDAA RHRLGDPDAS RRRARHEATV SSELEYRSQV IDDLVAADDD
RESEVVMLRS SDLAEALAGA FDPDDVAHDH LVGPFAHVVV DEAQELTDAA WQMVLRRCPS
RSLTVVGDRA QARGGFTETW QERLDRVGLT GVTVSPLTYN YRTPAAIMAE AEVVVRAAIP
DANVPVSVRT TSGHEVRHGS VDELETVLEE WLAEHPDGTA CVVGDPGFVG TSRVRSLAPE
LTKGLEFDLV VLVDPEALGS GVEGAVDRYV AMTRATERLV VLTH
|
|---|
| |