Gene Sked_13560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13560 
Symbol 
ID8632992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1528715 
End bp1529554 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content73% 
IMG OID 
ProductUndecaprenyl pyrophosphate synthetase 
Protein accessionYP_003314130 
Protein GI269794675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.179085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCA CCCCCAAGCC TGAGCCCGTG CGGCGTGCCG CCCCGATCCT CCCGCCGTCG 
CACCCCTCGG GGGAGACGGC GCCGGCGATC CCGCGCGAGT TCGTCCCGCA GCACGTCGCC
GTGGTCATGG ACGGCAACGG CCGGTGGGCC AACGCCCGCG GGCTGCCGCG GACCGCGGGC
CACGAGGCGG GGGAGGCCGC GCTCCTCGAC GTCGTGGCGG GCGCGATCGA CATCGGTGTC
CAGCACGTCT CCGCATACGC GTTCTCGACC GAGAACTGGA AGCGGTCACC GGAGGAGGTG
CGCTTCCTCA TGGGCTTCAA CCGCGACGTG CTCCGTCGCC AGCGGGACAC CCTGAACTCC
TGGGGCGTGC GGGTCCGCTG GGCCGGGCGC CGTCCCCGGC TCTGGCGCTC GGTGATCTCC
GAGCTCGAGG TGGCCGAGGA GCTCACCCGC GAGAACACGG TGTGCACCCT CACCATGTGC
GTCAACTACG GCGGTCGCGC CGAGATCGCC GACGCCGCGC AGGCCATCGG CCGCGAGGTC
GCCGCAGGCA GGCTCGACCC GTCCAAGATC ACCGAGAAGA CCGTCGCCCG GTACCTCGAC
GAGCCGGACC TGCCCGACGT CGACCTCTTC CTGCGGTCCT CGGGGGAGCA GCGCATCTCG
AACTTCATGA TCTGGCAGTC GGCCTACGCC GAGCTGGTCT TCATGAACCA GCTCTGGCCC
GACGTCGACC GCCGCACGCT GTGGCGGGCC GTCGAGGAGT ACGCGCGTCG CGACCGCCGC
TACGGCGGCG CGGTCGACGT GCCGTCGACC GCGCCGGCCG CCGGTGACCA GCCGGGCTGA
 
Protein sequence
MARTPKPEPV RRAAPILPPS HPSGETAPAI PREFVPQHVA VVMDGNGRWA NARGLPRTAG 
HEAGEAALLD VVAGAIDIGV QHVSAYAFST ENWKRSPEEV RFLMGFNRDV LRRQRDTLNS
WGVRVRWAGR RPRLWRSVIS ELEVAEELTR ENTVCTLTMC VNYGGRAEIA DAAQAIGREV
AAGRLDPSKI TEKTVARYLD EPDLPDVDLF LRSSGEQRIS NFMIWQSAYA ELVFMNQLWP
DVDRRTLWRA VEEYARRDRR YGGAVDVPST APAAGDQPG