Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_13540 |
Symbol | |
ID | 8632990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1526054 |
End bp | 1527796 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | 2-isopropylmalate synthase |
Protein accession | YP_003314128 |
Protein GI | 269794673 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.221191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCGAC CGACGCCGAT GCCGGTCCAC AAGTACCGCC CCTACTCCGA GCAGTTCCGC GTGGAGGTCC CCGACCGCAC GTGGCCGGAC AAGGTCATCA CCCAGGCCCC GCGCTGGTGC GCGGTCGACC TGCGCGACGG GAACCAGGCG CTCATCGAGC CGATGAACGC CGAGCGCAAG CTGCGCATGT TCGAGCTGCT CGTCTCGATG GGCTACAAGG AGATCGAGGT CGGGTTCCCC TCGGCCTCGC AGACGGACTT CGACTTCGTC CGCATGCTCA TCGACGACGG GCTGATCCCC GACGACGTGG TGATCCAGGT GCTGACGCAG TCCCGCGAGC ACCTCATCGC CCGCACCTAC GAGGCGATCG CGGGCGCCAA GCAGGCGATC GTCCACCTGT ACAACTCGAC CTCGACGCTC CAGCGCGACG TCGTGTTCCG CACGGACATG GACGGCATCG TCGACATCGC CCTCGAGGGC GCGCGCCTGT GCCGCAAGTT CGAGCAGACG ATCCCCGAGA CCCAGGTCTT CTACGAGTAC TCGCCCGAGT CCTACACCGG GACCGAGCTC GAGTTCGCCG CGCGCATCTG CAACGAGGTC ATCGAGGTCT TCGAGCCGAC CCCGGACCGC AAGGTGATCA TCAACCTGCC CGCCACGGTC GAGATGGCCA CGCCCAACGT GTACGCCGAC TCGATCGAGT GGATGAACCG TCACCTGGTG CACCGCGAGA ACGTGGTCCT GTCGCTGCAC CCGCACAACG ACCGCGGCAC CGCGGTGGCG GCCGCCGAGC TCGGCTACCA GGCCGGCGCC GACCGCATCG AGGGCTGCCT GTTCGGCAAC GGCGAGCGCA CCGGCAACGT CGACCTGGTG ACCCTGGGCA TGAACCTGTT CAGCCAGGGC GTCGACCCGC AGATCGACTT CACCGTCGGC GGCGGCATCG ACCACATCCG CCGCACCGTC GAGCACTGCA ACCAGCTGGC GGTCCACGAG CGCCACCCCT ACGCCGGTGA CCTCGTCTTC ACGGCCTTCT CGGGCTCGCA CCAGGACGCG ATCAAGAAGG GCCTCGACGC GATGGCCGCC GAGGCCGACG CGAAGGGCGT CTCGGTCGAC GACCTCGTGT GGGGCGTCCC GTACCTGCCG ATCGACCCGC GCGACCTGGG GCGCTCCTAC GAGGCCGTCA TCCGGGTCAA CTCGCAGTCC GGCAAGGGCG GCATCTCGTA CCTGCTCAAG ACCGAGCGCC ACCTGGACCT GCCGCGCCGC CTGCAGATCG AGTTCTCGCG CGTGGTGCAG TCGGTGACCG ACTCCGGCGG CCGCGAGGTC ACCGGCGAGG ACATCTGGCA GATCTTCGCC GACGAGTACC TGCCGGCCCC GGCCGACGGC CCGCTCGAGG CCTGGGGACG CCTGTCCCTT CGCGGCACGC GCGCCTCGAG CGTCGAGGGC GGCCTCGACA CCCTGTCCGT CGACCTGGTC GACGGCGGCA CGCCGATCAC GCTCGAGGGC ACCGGCAACG GCCCGATCGC GGCCTTCGTG GACGCGGTCA GCCAGGTGGG CGTCGACGTC CGCGTCCTCG ACTACGCCGA GCATGCTCTC TCCGAGGGTG GCGACGCGAC CGCGGCTGCC TACGTCGAGT GCGCCGTCGG CGACGAGGTC CTGTGGGGCG TGGGCATTGA CCCGTCGATC ACCACGGCCT CCCTCAAGGC GATCATCTCG GCCGTCAACC GCGAGGGCCG CACGGCCGCG TGA
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Protein sequence | MQRPTPMPVH KYRPYSEQFR VEVPDRTWPD KVITQAPRWC AVDLRDGNQA LIEPMNAERK LRMFELLVSM GYKEIEVGFP SASQTDFDFV RMLIDDGLIP DDVVIQVLTQ SREHLIARTY EAIAGAKQAI VHLYNSTSTL QRDVVFRTDM DGIVDIALEG ARLCRKFEQT IPETQVFYEY SPESYTGTEL EFAARICNEV IEVFEPTPDR KVIINLPATV EMATPNVYAD SIEWMNRHLV HRENVVLSLH PHNDRGTAVA AAELGYQAGA DRIEGCLFGN GERTGNVDLV TLGMNLFSQG VDPQIDFTVG GGIDHIRRTV EHCNQLAVHE RHPYAGDLVF TAFSGSHQDA IKKGLDAMAA EADAKGVSVD DLVWGVPYLP IDPRDLGRSY EAVIRVNSQS GKGGISYLLK TERHLDLPRR LQIEFSRVVQ SVTDSGGREV TGEDIWQIFA DEYLPAPADG PLEAWGRLSL RGTRASSVEG GLDTLSVDLV DGGTPITLEG TGNGPIAAFV DAVSQVGVDV RVLDYAEHAL SEGGDATAAA YVECAVGDEV LWGVGIDPSI TTASLKAIIS AVNREGRTAA
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