Gene Sked_13450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13450 
Symbol 
ID8632981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1515909 
End bp1516682 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content76% 
IMG OID 
Productconserved hypothetical protein TIGR00046 
Protein accessionYP_003314119 
Protein GI269794664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.959245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.237333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGC CGGTCTTCCT GGCCGAGTCC GGGAACCTGG GTGGGCTGAC CCAGGGTGAC 
ACCTACGTCC TCGACGGTCT CGAGGGACGC CACGCGGGCG TGGTCCAGCG GCGCGGCGTG
GGCGAGCGCA TCGACGTGGT CGACGGCGCG GGCCTGCGGC TGACCTGCCG GGTCACGGCC
GTCCAGGCCG CCGAGGTGAC CCTCGAGGTC GTCGAGTCGG TCCAGGAGAG CACCGACGGC
GTGTCCGTGG TGCTCGTGCA GGCCCTCGCC AAGGGGGACC GGGACGAGCT CGCGATCGAG
GCGGCCACCG AGGCCGGCGT CGACGCCGTG CTCCCGTGGC AGGCCGAGCG CTCGGTCGTG
GTGTGGCGCG GCGACCGTGC CGCGAAGTCG CGGGCCCGCT GGGTCGCGAC GGTGCGCGCG
GCCACCAAGC AGGCCCGGCG GGCGAGCCTG CCCGGTGTCG GCGAGGTCGT CGACGCCAAG
GGGCTCGCGG CACGGACCGC GCAGGTCGTC GCGTCGGGCG GCGTCGTGGT GGTCCTCCAC
GAGGAGGCGA CCCTGCCCAT CGCCCAGGTG CCCCTGCCGG CACGTACCGG TGACGCGGTC
GCCGAGGTCC TCGTGGTCGT CGGCCCCGAG GGCGGCATCA GCGACCGGGA GTGCACGCTG
CTCACCGAGG CCGGGGCGAC GCTCGCCCGG CTCGGGCCGC ACGTGCTGCG TACCTCGACC
GCCGGTCCGA TCGCCGTCGC GCTGCTGTCC GAGCGCCTGG GCCGGTGGGC GTGA
 
Protein sequence
MSAPVFLAES GNLGGLTQGD TYVLDGLEGR HAGVVQRRGV GERIDVVDGA GLRLTCRVTA 
VQAAEVTLEV VESVQESTDG VSVVLVQALA KGDRDELAIE AATEAGVDAV LPWQAERSVV
VWRGDRAAKS RARWVATVRA ATKQARRASL PGVGEVVDAK GLAARTAQVV ASGGVVVVLH
EEATLPIAQV PLPARTGDAV AEVLVVVGPE GGISDRECTL LTEAGATLAR LGPHVLRTST
AGPIAVALLS ERLGRWA