Gene Sked_13300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13300 
Symbol 
ID8632966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1497217 
End bp1498746 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content70% 
IMG OID 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_003314104 
Protein GI269794649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.801467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.209244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA TCGACGCTGC CCGTATCGGC ACCCTCATCC GCGACGCACG CAAGCTCCAC 
GGCTGGACCC AGGCGCACCT GGCCGACAAG ATCGGCACGA GCCAGAGCGC GGTCAACCGG
ATCGAGAAGG GCGGCCAGAA CCTCTCTCTC GACACCGTCC GACGCATATC GGAGGCACTC
GACGCCGAGC TCCTCACGCT CGGCCGCAGC GACGTCATGC ACCTGCGCGT GCACGGCGGC
CGCGAGCTCA GCGGCGCCGT CGACATCCGC TCCTCCAAGA ACGCCGCGGT CGCGCTGCTC
TGCGCATCCC TGCTCAACCG CGGCCGCACC ACGCTGCGCG GCGTGGCCCG CATCGCCGAG
GTGGACCGCA TCCTCGAGGT GCTGCGCAGC ATCGGCGTGA GCGCCGAGTG GACCGAGGAC
GGCCGCGACC TCGTGCTCCA GCCGCCCGCG ACGCTCGCCC TCGACGAGAT GGACCAGGAG
GCCGCGCGCC GCACCCGCAG CATCCTCATG CTCCTCGGCC CGCTGGTCCA CGACCGCCCG
ACCTTCACCC TCCCCTACGC CGGTGGCTGC GACCTGGGTA CCCGGACCGT CGAGCCGCAC
ATGCTCGCGC TGCGGCACTT CGGCGTCGAG GTCCGCGCCA CCGAGGAGCA GTACCACGTG
GACGTCGACC GCGACCGCCA GGCCGACGGC GCCATCGTCC TGGTCGAGCG CGGCGACACG
GTGACCGAGA ACGCGATCCT CGCCGCGGCC CGCCACGACG GCGTGACGAC CATCCGCAAC
GCGAGCCCGA ACTACATGGT CCAGGACCTC TGCTTCTTCC TCGAGGACCT CGGCGTGAAG
ATCGAGGGCG TCGGTACCAC GACGCTCGTG GTCCACGGCG TGCCCGTGAT CGACACCGAC
ATCGAGTACG CACCGTCGGA GGACCCGGTC GAGGCCATGA CCTTCCTGGC GGCGGCGATC
GTCACGAAGT CGTCGATCAC CATCCGGCGC GTGCCGATCG AGTTCGTCGA GATCGAGCTG
GCGATCCTGC GCACCATGGG CTTCCGCTAC GACATGACGG CCGAGTACAT GTCGACCAAC
GGCCGCACCC GCCTGGTCGA CATCACGACG CACGTGAGCG AGCTCAAGGC CCCGATCGAC
AAGATCCACG CGATGCCGTT CCCCGGCGTG AACATCGACA ACCTGCCGTT CTTCGCCGTG
ATCGCCGCGT CTGCCGAGGG CGGCACGATG ATCCACGACT GGACCTACGA CAACCGGGCC
ATCTACCTCA CCGAGCTCAC CAACCTCGGC GCCAACGTCC GCCTGCTCGA CCCGCACCGT
GTGCTCGTCG AGGGGCCGAC GCGCTGGCGC GGCGCCGAGC TCATGTGCCC GCCGGCGCTG
CGTCCCGCGG TCGTGGTGCT GCTCGGCATG CTCGCCGCGC AGGGCACGTC GGTGCTGCGC
AACGTCTACA TGATCCGCCG CGGCTACGAA GACCTCGCCG ACCGCCTCAC GGCGCTCGGC
GCGCAGATCA CGGTGTTCCG CGACATGTGA
 
Protein sequence
MTTIDAARIG TLIRDARKLH GWTQAHLADK IGTSQSAVNR IEKGGQNLSL DTVRRISEAL 
DAELLTLGRS DVMHLRVHGG RELSGAVDIR SSKNAAVALL CASLLNRGRT TLRGVARIAE
VDRILEVLRS IGVSAEWTED GRDLVLQPPA TLALDEMDQE AARRTRSILM LLGPLVHDRP
TFTLPYAGGC DLGTRTVEPH MLALRHFGVE VRATEEQYHV DVDRDRQADG AIVLVERGDT
VTENAILAAA RHDGVTTIRN ASPNYMVQDL CFFLEDLGVK IEGVGTTTLV VHGVPVIDTD
IEYAPSEDPV EAMTFLAAAI VTKSSITIRR VPIEFVEIEL AILRTMGFRY DMTAEYMSTN
GRTRLVDITT HVSELKAPID KIHAMPFPGV NIDNLPFFAV IAASAEGGTM IHDWTYDNRA
IYLTELTNLG ANVRLLDPHR VLVEGPTRWR GAELMCPPAL RPAVVVLLGM LAAQGTSVLR
NVYMIRRGYE DLADRLTALG AQITVFRDM