| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_13220 |
|---|
| Symbol | |
|---|
| ID | 8632958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1485597 |
|---|
| End bp | 1486289 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | Mn-dependent transcriptional regulator |
|---|
| Protein accession | YP_003314096 |
|---|
| Protein GI | 269794641 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.979168 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAGGTG AACTCGAGCT GACCTCCGTG GCGCAGGACT ATCTCAAGGT GGTCTGGAGC
GCCCAGGAGT GGTCGGACGA GCCCGTCACC ACCAAGCTGC TCGCCGAGCG CATCGGCGTC
GGGGCCTCCA CGGTCTCCGA GACGGTCCGG CGGCTGTCGG CCCAGGGGCT GCTCGAGCAC
CCGCGCTACG GCTCGGTCGA GCTGACGGAC CTCGGGCGCG CGCACGCCCT GCAGATCGTG
CGGCGCCACC GGCTCATCGA GACCTTCCTC GTGTCCGAGC TCGGGTACAC CTGGGACGAG
GTGCACGACG AGGCCGAGGT CCTCGAGCAC GCCGTCTCCG ACCTCATGGT CGACCGCATC
GACGCCCGCC TCGGGCACCC GGTCCGCGAC CCGCACGGCG ACCCGATCCC CGCGCCCGAC
GGCAGCGTCC CGACGCCGCC CGCGGTGACG CTCGCCGTGC TCGACGCCGG GACCACGGGC
TCGGTCGCGC GCATCTCTGA CGCGGACGGC GAGGTGCTCC GGTACTTCGC CGACCTCGGC
TTCGGTCTCG ACGCCCGCCT GCGGGTGGTC GAGCGCCGCG ACTTCGCCGG TGTCCTGTGC
ATCGAGTGGG CACCGGCCGA CGCCCCCGGG TCGACCAGCA CGGTCGACCT CGGGCTCCGG
GCCGCCGACG CGGTCTGGGT CGTGACCGAG TGA
|
|---|
| Protein sequence | MTGELELTSV AQDYLKVVWS AQEWSDEPVT TKLLAERIGV GASTVSETVR RLSAQGLLEH
PRYGSVELTD LGRAHALQIV RRHRLIETFL VSELGYTWDE VHDEAEVLEH AVSDLMVDRI
DARLGHPVRD PHGDPIPAPD GSVPTPPAVT LAVLDAGTTG SVARISDADG EVLRYFADLG
FGLDARLRVV ERRDFAGVLC IEWAPADAPG STSTVDLGLR AADAVWVVTE
|
|---|
| |