Gene Sked_13080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13080 
Symbol 
ID8632944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1470020 
End bp1471018 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content69% 
IMG OID 
ProductDNA end-binding protein Ku 
Protein accessionYP_003314083 
Protein GI269794628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.467677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCTA TCTGGAAAGG TGCCGTGACC TTCGGGCTCG TCAACGTGCC CGTGAAGCTC 
TACAGCGCCA CCGAGGACCA CGACGTCGGC CTGCACCAGG TCCACGACAC CGACGGCGGA
CGCATCCGCT ACCAGCGGCG CTGCGAGGTG TGCGGCAAGG TCGTCGACTA CGGGCACATC
GCCAAGGCGT ACGACGACGG CGAGCGCACC GTGGTGCTCA CCCCCGACGA CCTCGACGCG
CTGCCCGTCG AGCGCAGCCG CGAGATCGAC GTGGTCGAGT TCGTGCCGCG CGACCAGATC
GACCCGATCA TGTACGAGCA CGCGTACTAC CTCGAGCCCG ACTCCAAGTC CGTGAAGTCC
TACCGGCTGC TGGTCCGCGT CCTCGAGGAG AGCGACCGCG TGGCCGTCGT GTCCTTCTCG
CTGCGTCAGC GCACCCGCCT CGCGGCACTG CGCGTCCGCG GCGACGTCCT GCTGCTGCAG
GTGCTGCGCT GGGACGACGA GGTGCGCGAG CCCGAGTTCC CGTCGCTCGA CGAGACCCCG
CGGATCACCG CGAAGGAGCT CGAGATGGCC TCCGCGCTCG TCGCGAGCTT CGAGAGCGAC
TTCGAGCCCG AGAAGTTCAC CGACGACTAC CAGGTGCAGC TCCGCACCCT CATCGACGCC
AAGCTCGAGC ACGGCGACGC CGTCGACACC GCCGCGACCT TTGGCGAGGA GCCAGAGGAG
GACAGCGGCG GCGACGCCGA GGTCGTCGAC CTCATGGAGG TCCTGCGCCG CAGCGTCGAG
AGGTCTCGCG GCGGGTCAGA GGAGAAAGAC GGCGCGGGTA CGAGGTCCGG GGCGGGGGAG
AAGGCCACGT CGACGAAGAA GGCCACCGCG CGCAAGCCCC CGGCGAAGAA GACCCCGGCG
AGCAAGACCC CGGTCAAGAA GACCTCCGAC CGGGCCACCG CGAAGAGGAC CACTGCGAAG
AAGAGCACGT CGGCGAAGGC CGCCGACAAG GCGAGCTGA
 
Protein sequence
MRAIWKGAVT FGLVNVPVKL YSATEDHDVG LHQVHDTDGG RIRYQRRCEV CGKVVDYGHI 
AKAYDDGERT VVLTPDDLDA LPVERSREID VVEFVPRDQI DPIMYEHAYY LEPDSKSVKS
YRLLVRVLEE SDRVAVVSFS LRQRTRLAAL RVRGDVLLLQ VLRWDDEVRE PEFPSLDETP
RITAKELEMA SALVASFESD FEPEKFTDDY QVQLRTLIDA KLEHGDAVDT AATFGEEPEE
DSGGDAEVVD LMEVLRRSVE RSRGGSEEKD GAGTRSGAGE KATSTKKATA RKPPAKKTPA
SKTPVKKTSD RATAKRTTAK KSTSAKAADK AS