Gene Sked_13020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13020 
Symbol 
ID8632938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1460897 
End bp1462396 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content69% 
IMG OID 
Productmalate:quinone-oxidoreductase 
Protein accessionYP_003314077 
Protein GI269794622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGACA GCACAGCATC CCCCAGCACC CCGGTCGACG TCGTCCTGGT CGGTGGCGGA 
ATCATGAGCG CGACGCTCGG ATCCATCATC CGGCTGCTCG AGCCGACGTG GACGATCCGC
ATCTACGAGC GCCTCGACGA GGTGGCGCAG GAGAGCTCCA ACGCGTGGAA CAACGCGGGC
ACCGGGCACG CCGCCCTGTG CGAGCTCAAC TACACGCCTG AGAAGGCCGA CGGCTCGATC
GACATCACCA AGGCGGTGGC GATCAACGAG CAGTTCCAGA CGTCGCGCGA GTTCTGGCAG
CACCTGGTCA CCGCTGACCT GCTGCCCGAG CCCGAGGGCT TCATCGCCTC GACCCCGCAC
ATGACCTTCG TCCGCGGCGC CGCGAACGTC GACTACCTGC GTCGTCGGCA CGCCGCCCTC
GTCGCGCACC CGCTCTTCAG CGACCTGGAG TTCAGCGACG ACCCCGCCGT CGTCGGCGGG
TGGGCACCGC TGCTCATGGC CGAGCGGTCG GGTGACGAGC CCGTCGCTGC GACGCGCGCG
ACCTCGGGCA CCGACGTGAA CTTCGGCGCG CTCACCCACA AGCTCACCGA CTATTTGGTC
TCGACCGGTG CACAGCTGCA CCTCGAGCAC GAGGTCACGT CGCTGCGTCA GCGCAAGGAC
GGCTCGTGGC GCCTCAAGGT CGCCGACCGC TCCTGGAACG CCCCCGAGCG CCGCAGCACG
GTCGACGCGA GGTTCGTGTT CATCGGTGCC GGCGGTGGCG CCCTGCCGCT GCTGCAGAAG
GCCGGGATCC CCGAGGCCAA GGGCTACGGC GGCTTCCCCA TCAGCGGGCA GTTCCTGCGG
ACCACCAACC CGGAGCTCGT CGCCCAGCAC CAGGCGAAGG TCTACGGCAA GGCCGACGTC
GGCTCACCGC CCATGTCCGT GCCGCACCTC GACACCCGTG TCGTGGACGG CGAGACCTCG
CTGCTCTTCG GCCCGTACGC GGGCTTCAGC ACCAAGTTCC TCAAGAAGGG CTCGCTGCTC
GACCTGTTCC TGTCGATCCG CCCGAGCAAC ATCGTCACGA TGCTCGCGGT CGCCAAGGAC
AACATGGACC TCACCAAGTA CCTGATCAGC GAGGTCACGA AGTCGCGCTG GAGCAAGTTC
AAGACGCTGC GCACCTTCAT GCCGACGGCC GACCCCAAGG ACTGGGAGCT CATCACCGCC
GGGCAGCGCG TCCAGGTGAT GAAGAGCCAC CCCGAGAAGC ACGGTGTCCT CGAGTTCGGC
ACGGAGCTCA TCACCGCCGA GGACGGCACC ATCGCCGGCC TGCTCGGGGC CTCCCCCGGT
GCGTCGACGG CTGTCCCCGC GATGATCGAC CTGCTCGAGC GCTGCTTCCC GCAGCAGTTC
CCCGCCTGGC ACCGCGAGCT CGCCACGATG ATGCCGAGCC TCGCCCCGCA GCAGTGGGAC
TCCGAGGAGG CCTTCGCAGA GCTCCAGGCC GACGACGCGG ACTTCCAGCC GAGCGCCTGA
 
Protein sequence
MADSTASPST PVDVVLVGGG IMSATLGSII RLLEPTWTIR IYERLDEVAQ ESSNAWNNAG 
TGHAALCELN YTPEKADGSI DITKAVAINE QFQTSREFWQ HLVTADLLPE PEGFIASTPH
MTFVRGAANV DYLRRRHAAL VAHPLFSDLE FSDDPAVVGG WAPLLMAERS GDEPVAATRA
TSGTDVNFGA LTHKLTDYLV STGAQLHLEH EVTSLRQRKD GSWRLKVADR SWNAPERRST
VDARFVFIGA GGGALPLLQK AGIPEAKGYG GFPISGQFLR TTNPELVAQH QAKVYGKADV
GSPPMSVPHL DTRVVDGETS LLFGPYAGFS TKFLKKGSLL DLFLSIRPSN IVTMLAVAKD
NMDLTKYLIS EVTKSRWSKF KTLRTFMPTA DPKDWELITA GQRVQVMKSH PEKHGVLEFG
TELITAEDGT IAGLLGASPG ASTAVPAMID LLERCFPQQF PAWHRELATM MPSLAPQQWD
SEEAFAELQA DDADFQPSA