Gene Sked_12920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12920 
Symbol 
ID8632928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1453899 
End bp1454891 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content72% 
IMG OID 
Productpredicted oxidoreductase, aryl-alcohol dehydrogenase like protein 
Protein accessionYP_003314068 
Protein GI269794613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA GGACAGCGTC ACGCCTCCCC TTCTCCGTCA GCTCCGTCGG CCTCGGCTGC 
TGGCAGCTCG GCGGCGACTG GGGTGAGGTC ACCGAGGGCT CGGCGCACGG CGTGCTCGGC
GCCGCCGCCC ACGCGGGCGT CACGTTCTTC GACACCGCGG ACGTCTACGG CGACGGTCGA
AGCGAGCGCC TCGTCGGGTC GTTCCTCGAC GCGCGCGGCG TCGACGACGT GCGCGTCGCC
ACCAAGATGG GCCGCCGGGC CGACCCGCAC GAGCCGAGCG CCTTCACCCT CGACGCGTTC
CGCGAGTGGA CCGACCGCAG CCGACGGAAC CTGGGTGTCG ACACCCTCGA CCTCGTCCAG
CTGCACTGCC CGCCCACGCC GGTGTTCTCC GACGACGCGG TCTACGACGC CCTCGACACC
CTCGTGGCCG ACGGTGCGAT CGGCGCGTAC GGCGTCTCGG TCGAGACCTG CGCCGAGGCA
CTCACCGCGA TCGCGCGCCC GAACGTGGCG AGCGTCCAGA TCATCCTCAA TGCCTTCCGT
CGCAAGCCCC TCGAAGAGGT GCTGCCCGCC GCACGCGAGG CCGGGGTCGC GATCATCGCG
CGCGTGCCGC TCGCGAGCGG CCTGCTGTCT GGCAAGTACG ACGAGTCGAC GACCTTCGCG
GCCGACGACC ACCGCACCTT CAACCGTGCC GGCGCCGCCT TCGACGTCGG CGAGACCTTC
GCCGGCGTGC CCTTCGAGGT GGGGGTGGCC GCAGCCCGCG AAGTCGCCGC GATCCTGCCC
GAGGGCTCGA CCGCGACCAC GTCGCAGCTC GCGCTGCGGT GGATCCTCGA CCAGCCCGGC
GTGACGACGG TGATCCCCGG TGCACGGAAC GCCTCCCAGG CGGAGGGCAA CGCGGCCGCG
GCCGACCTCC CGCCGCTCAC GGACGAGCAG CTCGCGCGGT TCGAGGAGAT CTACGACCAG
TCGATCCGGA CCCACGTCCA CGACCGCTGG TGA
 
Protein sequence
MDIRTASRLP FSVSSVGLGC WQLGGDWGEV TEGSAHGVLG AAAHAGVTFF DTADVYGDGR 
SERLVGSFLD ARGVDDVRVA TKMGRRADPH EPSAFTLDAF REWTDRSRRN LGVDTLDLVQ
LHCPPTPVFS DDAVYDALDT LVADGAIGAY GVSVETCAEA LTAIARPNVA SVQIILNAFR
RKPLEEVLPA AREAGVAIIA RVPLASGLLS GKYDESTTFA ADDHRTFNRA GAAFDVGETF
AGVPFEVGVA AAREVAAILP EGSTATTSQL ALRWILDQPG VTTVIPGARN ASQAEGNAAA
ADLPPLTDEQ LARFEEIYDQ SIRTHVHDRW