Gene Sked_12860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12860 
Symbol 
ID8632922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1450752 
End bp1451597 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content72% 
IMG OID 
Productmetalloendopeptidase-like membrane protein 
Protein accessionYP_003314062 
Protein GI269794607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CCCTGGCGGT CTACAGGGTC CGCATGCCGC TCCTGCTCGG TTCGGCGGTG 
ACGATCATCG CGGCGACCGT GCTGTCCCTC GCGCTGCCGG ACGGCCCCGT CGCCTCCGTG
GTCGGGGTGC TGCCACTGGT GGGAGTGGTC GGGATGCTGG TCGCGTTCTC ATCCTCCCTA
CCTGCCGCCC GTCATCTTCC GGCAGGGGAG CCCGTCGTGG TGCGGTCGCC CGTCGTCGGA
CGGTGGGCTG CACTCAACAG CCCGGCGACC AAGGTCCCGA GCCACGGGGT GCGCGCCTAC
GGCCAGGCCT ACGCGATCGA CCTCGTCCAC GAGCCTCTCG ACCAGGACCG CCCGGAGTTC
GGCTCCGGTG CCGCGATGCG CGACGTCGCG GACTACCCGG CCTTCGGGCA GGACGTGCGG
GCGATGGTCG ACGGCGTCGT CGTCACCGCG CACGACCGTC AGCGGGACCA CCGCGCACGC
TCCTCGATGG CCGCGGTCGT CTACATGATG GCCGAGGGGA TGCTGCGCGA GCTCGGCGGG
CCGCGGTTCA TCATCGGCAA CCACGTGGTG ATCCGCACCG ACGACGGCGT GTTCGCCCTC
GTCGCCCACC TGCAGCGCGG CTCCGTGGCC GTGCGGGAGG GGGAGAGGGT GCAGGCCGGT
CAACGCATCG GGTCGTGCGG GAACTCGGGC AACAGCAGCG AGCCGCACGT CCACGCCCAC
CTCATGGACC GCAGGTCCGC ATGGACCGGT CAGGGGCTCC CGATCGCGTT TACCGACGTG
GCCGTCGAGG ACGCCGCACC GGGCGTCGGG CTCCCGGGCA ACGGCGAGCA CATGACGGTC
CGGTAG
 
Protein sequence
MSAALAVYRV RMPLLLGSAV TIIAATVLSL ALPDGPVASV VGVLPLVGVV GMLVAFSSSL 
PAARHLPAGE PVVVRSPVVG RWAALNSPAT KVPSHGVRAY GQAYAIDLVH EPLDQDRPEF
GSGAAMRDVA DYPAFGQDVR AMVDGVVVTA HDRQRDHRAR SSMAAVVYMM AEGMLRELGG
PRFIIGNHVV IRTDDGVFAL VAHLQRGSVA VREGERVQAG QRIGSCGNSG NSSEPHVHAH
LMDRRSAWTG QGLPIAFTDV AVEDAAPGVG LPGNGEHMTV R