Gene Sked_12730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12730 
Symbol 
ID8632909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1440337 
End bp1440891 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003314049 
Protein GI269794594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.330444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.769742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT CGGAGCAACC GGAGAGGCCC ACGGGATACT GGTACGACAA CAGTGACTCC 
GTGGTCGAGA TCCTGCACGC CCTGAGACGT TTCCGCCAGA GCGACCAGGG CATGCGCCGC
CGCATGAGCG TCGACATGGC CATGAACGAG TCCGACATGC AGGCCCTCCA GCACGTCGTC
ATCTCCACCA GCAACGGCCA GCAGGCCACG CCCCGGGACC TCGCACGGTT CCTCGGGATC
TCGAGCGCGT CGACCACCAA GCTCCTCGAC CGGCTGTCCG CCTCCGGGTA CCTCGAGCGC
CACCCGCACC CGACAGACAG GCGCGGCCTG GTCATCACCG CGACGCAGCA CGCGCACGAC
GAGCTGCAGG CCCGGATGAC CGGCATGCAC CGCCGGCTCC GCGAGCTCGC CGCGACGGTG
CCGCCCGAGT CCCGGCAGGC CGTGGTCGAC TTCCTCACGG CTGTCTCCGA CCACCTCGAG
ACCGAGGGCG GGACACGCTC GGAGGGCTCG GCAGAAGGTC CCGACGTGGC TGCGATCCTC
AGGCCCCTGG TCTGA
 
Protein sequence
MTTSEQPERP TGYWYDNSDS VVEILHALRR FRQSDQGMRR RMSVDMAMNE SDMQALQHVV 
ISTSNGQQAT PRDLARFLGI SSASTTKLLD RLSASGYLER HPHPTDRRGL VITATQHAHD
ELQARMTGMH RRLRELAATV PPESRQAVVD FLTAVSDHLE TEGGTRSEGS AEGPDVAAIL
RPLV