Gene Sked_12670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12670 
Symbol 
ID8632903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1436343 
End bp1437095 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content71% 
IMG OID 
ProductDNA-binding domain-containing protein, AraC-type 
Protein accessionYP_003314043 
Protein GI269794588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTGA CCATCGTCAG CGCCGCCAGG TTCCTCGTCG AGCACTCCGA CGAGCCTGTC 
ACGCTGCACG ACCTCGCCGA CCACGTCGGG TACAGCCCGT TCCACGTCGC GCGGTCCTTC
GAGAAGTTCG TCGGCATGCC GCCGGGGCAG TTCCTCGCGG CGCACCGGTT CCAGCGCGCC
AAGCAGATGC TGCTGTCCGG TGAGGACAAG GTGGTCGACA TCTGCAACGC GGTGGGTTTC
AGCTCGGTCG GCACCTTCAC CACCCGGTTC GTCAAGGTGG TCGGACTCAG CCCGACCGAG
TTCCGCAGGC TCCCGCACAC CCTCGCCGAG CGCAAGCCAC GGCCGGTGAG CAACCGTGGG
CCCGCGCGGG ACGGGACGGT GATCACCGGG TCGGTCCACC TGAGCCCCGC CGCCGAGGCT
GCCGTAGGAC TCGAGCCCGC GGTCTACGTC GGGCTGTTCC GTCGTCGGGC CGCGCAGGGT
GTCCCGATCG CCGGGACCCT CATGGGCCCC GAGGGGTACT TCATCCTCAT GGACGTCCCA
CCGGGAGCGT TCTGGTTGCT GGTCTCGGCG CTCCCCTCGC GTGAGGACGC CCCGGGTCAG
CTGGTCCCGG CGACCCAGGT GGTCGGGGCC GCGACGCGTC CCGTGCTCGT CCCCGCACGT
CCGACGTCGC TGGTGCGTGA CGTGAGCATC GACGTGGCCC CCGACTGGGG CGCGCCGGTG
CTCGTCGCGT TGCCGCCGCT CGCAGCCGTG TGA
 
Protein sequence
MYLTIVSAAR FLVEHSDEPV TLHDLADHVG YSPFHVARSF EKFVGMPPGQ FLAAHRFQRA 
KQMLLSGEDK VVDICNAVGF SSVGTFTTRF VKVVGLSPTE FRRLPHTLAE RKPRPVSNRG
PARDGTVITG SVHLSPAAEA AVGLEPAVYV GLFRRRAAQG VPIAGTLMGP EGYFILMDVP
PGAFWLLVSA LPSREDAPGQ LVPATQVVGA ATRPVLVPAR PTSLVRDVSI DVAPDWGAPV
LVALPPLAAV