Gene Sked_12520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12520 
Symbol 
ID8632888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1422791 
End bp1423582 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID 
Productshort-chain dehydrogenase of unknown substrate specificity 
Protein accessionYP_003314028 
Protein GI269794573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTCC AGCTACGTGG CAAGACAGCG TTCGTCAGCG GTTCGACGCA GGGGATCGGG 
CGCGCGGTGG CGTCGAGGCT CGCCGCAGAG GGGGCGAGGG TCGTCGTGAA CGGTCGCGAC
CCCGAGACGG TCGACGCGGT CACGACCGAG CTGCGGCGCG CCCATCCCGG TGCAGATCAC
TCTGGGATCG CCGCAGACTT CGCCGACCCG ACCTCCGTCG AGACGCTCGT CGCCGAGCTC
GGTGACGTGG ACATCCTCGT CAACAACGTC GGGCTCTTCG GTCTCGGCAG CTTCGAGTCG
ACCACCGACG AGGAGTGGGA CCACTACCTC GAGGTCAACC TCATGAGCGG GGTCCGCCTC
TCCCGCCACG TCCTGCCCGG GATGCTCGAG CGAGGCTGGG GTCGAGTCCT CTTCGTCAGC
AGCGAGTCCG GCGTGAACGT CCCCGCCGAC ATGATCCCCT ACGGGGTCAC CAAGGCCGCG
ATGATCGCCC TCGGCAACGG TCTGGCCAAG CGCACCCGTG GCACGGCGGT GACGGTCAAC
ACGGTGCTCG GCGGCCCGAC GTACTCGGAC GGCGTGGCGT CCGCGGTCGA GGCGGTCGCA
GCCGCTCAGT CCGCGCCGGC GGAGGCGGTC AAGGCCTCGA TCATCGGCCA GAACCGGACC
ACGCTGCTCG AGCGGTTCAT CGAGCCGGAC GAGGTCGCGT CGCTGGTGGT CTACCTGGCG
AGCCCGCTCG CGTCGGCGAC GAACGGGGCA GCAGTGCGAG GGGACGGCGG GGTGCTCACC
GGGATGCTCT GA
 
Protein sequence
MDLQLRGKTA FVSGSTQGIG RAVASRLAAE GARVVVNGRD PETVDAVTTE LRRAHPGADH 
SGIAADFADP TSVETLVAEL GDVDILVNNV GLFGLGSFES TTDEEWDHYL EVNLMSGVRL
SRHVLPGMLE RGWGRVLFVS SESGVNVPAD MIPYGVTKAA MIALGNGLAK RTRGTAVTVN
TVLGGPTYSD GVASAVEAVA AAQSAPAEAV KASIIGQNRT TLLERFIEPD EVASLVVYLA
SPLASATNGA AVRGDGGVLT GML