Gene Sked_12230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12230 
Symbol 
ID8632859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1402930 
End bp1403529 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content76% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003313999 
Protein GI269794544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCG TCACTCCCGC CACCCGTCCC GCGGGCCGTC CGCGCGCGTC CTCCCGCGCG 
ATGCTGGAAG AGGCGGCCGG CGAGCTGTTC CTCGAGCGCG GGTACTCCGC CACCTCCGTC
GCCGACATCA CCGCCCGGGC AGGCGTGAGC CGCAACACCT TCTTCAACTA CTTCGGCGCC
AAGAGCGACC TCCTGTGGTC CACCTTCGAC GCGACGGTCG CCGGGCTGGG CGAGGCGCTG
GCCGACCCGC GGCTCGACGA CGGCACCCCT CGCGGCACCG CGCGGGCAGC GCTCATGGAG
GTCGCCGGGG CGCTGCGTCC CGACAACGTG TCCCTCGCCT TCACCCACGC CGACACCATG
GGTCTGGCCG ACGAGCTCCG CCGTGCCGCC GCCCTCCGGG CGAGCGACGT CGCCGTCGTG
CTCACGGCCT TCGCCGTCGC CCGCGGGGTC GAGCCGCTGC GCGCCGAGGT GGCGGGAGCC
GCCTACGCCG GGGCGCTCGT CGCCGCCGTC GGGGAGTGGT CACGCTCCGG AGCGGTCCGC
ACCTCGCTGT CCGACGTGCT GGCGAGGGCC CTCGAGCCGG TCGAGGGCGC GCTGCCCTGA
 
Protein sequence
MSPVTPATRP AGRPRASSRA MLEEAAGELF LERGYSATSV ADITARAGVS RNTFFNYFGA 
KSDLLWSTFD ATVAGLGEAL ADPRLDDGTP RGTARAALME VAGALRPDNV SLAFTHADTM
GLADELRRAA ALRASDVAVV LTAFAVARGV EPLRAEVAGA AYAGALVAAV GEWSRSGAVR
TSLSDVLARA LEPVEGALP