Gene Sked_11950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11950 
Symbol 
ID8632831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1380865 
End bp1381605 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content70% 
IMG OID 
Productresponse regulator with putative antiterminator output domain 
Protein accessionYP_003313972 
Protein GI269794517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0191471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCC ACAGCACCCC GCCGACGTCC GACCTCACCG TCTCCGACCG CGTCGCCGAC 
GCCGCCCGGC AGCTCGCGGA CGAGCCGACG CTCGACCAGA CGCTGCAGAG CATCGTGAAC
CTCGCGGTGG AGATGGTCGA GGGGTGCTCT GCCGCCGGGA TCACACACGT GCTCGGTCGT
GAGATCACGA CGACCGCTGC CACCGACCCG GGTGTGCGGA TCGGCGACCG GCTGCAGTAC
GAGCTCGACG AGGGGCCGTG CCTCGACGCG GTCCGGGCTC ACGAGGTCGT CCACTCGTCC
GACATCGTCT CCGACGAGCG CTGGCCGCGC TGGGCGCCTG CTGTCGACGC GAAGATCGGC
GTCAAGAGCA TGCTCGCGGT GCAGCTCTAC ACGAGCGAGA CCACGCACGG TGCGCTGAAC
CTCTACTCCA CGGACGTCGA CGCCTTCACG CCGACCGACA TCTCGCTCGC GGCGTCCTTC
GCCGCGGTCG CCGCCGCCGC GATCCAGGCC GCGCAGACCG AGGAGCAGCT GACCTCTGCG
GTGCTGAGCC GGACGGTGAT CGGCCAGGCG CAGGGGATCG TCATGGAACG GTTCGGCCTC
TCGGCGGAGA ACGCCTTCTC GGTGCTGAGC CGGCTGTCCC AGGACTCCAA CACCAAGCTG
GTGCAGGTCG CGCAGGAGAT CGTGTCGACC CGTCGGCTGC CCGGGACGTC GTCCGACGCA
GGTTCGCCCG GGCGGGGCTG A
 
Protein sequence
MTGHSTPPTS DLTVSDRVAD AARQLADEPT LDQTLQSIVN LAVEMVEGCS AAGITHVLGR 
EITTTAATDP GVRIGDRLQY ELDEGPCLDA VRAHEVVHSS DIVSDERWPR WAPAVDAKIG
VKSMLAVQLY TSETTHGALN LYSTDVDAFT PTDISLAASF AAVAAAAIQA AQTEEQLTSA
VLSRTVIGQA QGIVMERFGL SAENAFSVLS RLSQDSNTKL VQVAQEIVST RRLPGTSSDA
GSPGRG